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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_447920

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. phosphoenolpyruvate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_447920Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiD8T3J3.
KOiK01595.
OMAiCNDEVRI.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8T3J3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALSLRKMVS IDDRMRLLVP TKVTADDKLI EYDMLLLNHF LSVLKDLHGE
60 70 80 90 100
EMRELVHRCY ELSGQYGQAE GCGDPAKLED LGNLVKSLQP GPAIVIASSL
110 120 130 140 150
SHMLNLGNLA EEVQIAHRRR VSEKSGGIGD ENSALTESDI EETFRRLMKL
160 170 180 190 200
GKSPQEIFEA LKTQTVDLVL TAHPTQSIRR SLLQKHSRIR SCLSELYKDD
210 220 230 240 250
ITPDEKQELE EALHREVQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWN
260 270 280 290 300
CLPKFLRRVD TALKAIGINE RLPYNVPLIQ FSSWMGGDRD GNPRVTPEVT
310 320 330 340 350
RDVCLLARLM ASSLYFSQIE DLMFELSMWR CNEELRARVA QLELRTKEDA
360 370 380 390 400
KHYKAAVTEF WKPIPSNEPF RVILGDIRDR LYRTRERARQ ILATGKSDVN
410 420 430 440 450
EEEAFSSVEE ILEPLELCYR SLCSTGDKLI ADGSLLDFMR QVSCFGLGLV
460 470 480 490 500
RLDIRQESDR HTDVMDAITT HLGIGSYRSW TEEERQEWLL AELRGKRPLF
510 520 530 540 550
GADLPKTDEI KDVLETFHVI AELPTDCFGA YIISMATAPS DVLVVELLQR
560 570 580 590 600
ECRVNVPLRV VPLFEKLADL EAAPASLTRL FSIDWYRNRI KGKQEVMIGY
610 620 630 640 650
SDSGKDAGRF SAAWQLYKCQ EELVKVAKQF GVKLTMFHGR GGTVGRGGGP
660 670 680 690 700
THLAILSQPR DTIDGSLRVT IQGEVIEQSF GEEHLCFRTL QRFTAATLEH
710 720 730 740 750
GMHPPTAPKE DWRKLMDEMA AIATEAYRSV VFKDPQFVHY FRMATPELEY
760 770 780 790 800
GRMNIGSRPS KRKPSGGIES LRAIPWIFAW TQTRFHLPVW LGFGEAFKDV
810 820 830 840 850
IDGNPQTLKM LQAMYREWPF FRVTVDLVEM VFAKGDPRIA ELYDRLLVSP
860 870 880 890 900
ELQDIGKKLR GKYEETRKLL LEVACHSELL EENPTLKQRL RLREPFITTL
910 920 930 940 950
NVQQAYTLKK MRQIEPDDAP MPRTNANSAS AEELVELNTT TEYAPGLEDT
960
IILTMKGIAA GMQNTG
Length:966
Mass (Da):110,014
Last modified:October 5, 2010 - v1
Checksum:i937A9B214E082D3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377670 Genomic DNA. Translation: EFJ08755.1.
RefSeqiXP_002990195.1. XM_002990149.1.
UniGeneiSmo.14879.

Genome annotation databases

EnsemblPlantsiEFJ08755; EFJ08755; SELMODRAFT_447920.
GeneIDi9647668.
KEGGismo:SELMODRAFT_447920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377670 Genomic DNA. Translation: EFJ08755.1.
RefSeqiXP_002990195.1. XM_002990149.1.
UniGeneiSmo.14879.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEFJ08755; EFJ08755; SELMODRAFT_447920.
GeneIDi9647668.
KEGGismo:SELMODRAFT_447920.

Phylogenomic databases

InParanoidiD8T3J3.
KOiK01595.
OMAiCNDEVRI.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8T3J3_SELML
AccessioniPrimary (citable) accession number: D8T3J3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.