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D8T2I1

- D8T2I1_SELML

UniProt

D8T2I1 - D8T2I1_SELML

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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_6910

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_6910Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiD8T2I1.
KOiK06670.

Family and domain databases

InterProiIPR006910. Rad21_Rec8_N.
[Graphical view]
PfamiPF04825. Rad21_Rec8_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D8T2I1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MFYSQYILAK KGPLGTIWIA AHLEKKLRKN QVNDTNISTS VDSILFPEVP
60 70 80 90 100
IALRLSGHLL LGVVRIYSRK VNYLFHDCND ALVKLKNAFS SATSASVDLP
110 120
ADAASAPFHS ITLPETFEFD DID
Length:123
Mass (Da):13,638
Last modified:October 5, 2010 - v1
Checksum:i8CFCF133A2C1D186
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei123 – 1231Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377666 Genomic DNA. Translation: EFJ09061.1.
RefSeqiXP_002989794.1. XM_002989748.1.

Genome annotation databases

EnsemblPlantsiEFJ09061; EFJ09061; SELMODRAFT_6910.
GeneIDi9629299.
KEGGismo:SELMODRAFT_6910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377666 Genomic DNA. Translation: EFJ09061.1 .
RefSeqi XP_002989794.1. XM_002989748.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ09061 ; EFJ09061 ; SELMODRAFT_6910 .
GeneIDi 9629299.
KEGGi smo:SELMODRAFT_6910.

Phylogenomic databases

InParanoidi D8T2I1.
KOi K06670.

Family and domain databases

InterProi IPR006910. Rad21_Rec8_N.
[Graphical view ]
Pfami PF04825. Rad21_Rec8_N. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8T2I1_SELML
AccessioniPrimary (citable) accession number: D8T2I1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3