D8SVT1 (D8SVT1_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFJ11553.1

Gene names

ORF Names:

SELMODRAFT_446978 EMBL EFJ11553.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome]

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	835 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. SAAS SAAS001214 RuleBase RU004538

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA mediated transformation Inferred from electronic annotation. Source: EnsemblPlants/Gramene histone methylation Inferred from electronic annotation. Source: EnsemblPlants/Gramene leaf morphogenesis Inferred from electronic annotation. Source: EnsemblPlants/Gramene negative regulation of molecular function, epigenetic Inferred from electronic annotation. Source: EnsemblPlants/Gramene regulation of gene expression by genetic imprinting Inferred from electronic annotation. Source: EnsemblPlants/Gramene vegetative to reproductive phase transition of meristem Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	PcG protein complex Inferred from electronic annotation. Source: InterPro
Molecular_function	single-stranded RNA binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8SVT1 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 0BBC1B6259FA826F	FASTA	835	93,547
	10 20 30 40 50 60 MQSMEEGEAS GKVSMAALSA TFTRLKKQVA FERQAYVKAR MDANSERLQG FCTHLLALSS 70 80 90 100 110 120 SRAVNNRNHA DNDMLNTRIQ KALNKLGTDP AAADQQCGSQ DDSSAPILFN NSGGKSIVKP 130 140 150 160 170 180 VRLQTVQKTP PYTTWIFLDR NQRMAEDQSV VGRRRIYYDS AENEALICSD SEEEQVEEEE 190 200 210 220 230 240 EKRDFSKGDD FLIRATVQEH GLSKMMFKAL ADCLDAKPSE IEARYEILAK DGDKLKSEEK 250 260 270 280 290 300 HDLLSAMDSF DNLFCRRCLV FDCRLHGCSQ PVIIPFDKQT PLNKTGELPS VPCGPCCFHL 310 320 330 340 350 360 PRLSSHHDAT SSGVESKPVP VESTAPAIEK SWQVSDSKDK GVATEPVAKT VDKPPEAPKK 370 380 390 400 410 420 SFKDKSVTAL RRLLLKRKAT RHTDDDTNEA RKKHHVEGSH AEVGDGSGNA TRGENTGASM 430 440 450 460 470 480 YLKKLVSKKL YAQRKWKGSQ ITTVKRPPPV IKEPEDVMQS ISKNLTLYDS NWNTLEKDLY 490 500 510 520 530 540 ETGLQIFGRD SCLISRNLLR GMKSCAEVGE FMQLEAAVNW KLNEETKLQQ DGNTVIEDAT 550 560 570 580 590 600 EIDRSRSRLY NGRRRGRVRR LKYTWKSVGY PAIRKRLVDG KDGCRQYTPC SCSESCGKQC 610 620 630 640 650 660 SCHRNGTCCE KYCGCSKNCK NRFRGCHCAK SQCSSRQCPC FAAGRECDPD VCRNCWIGCG 670 680 690 700 710 720 DGSQGGPPAR GDSYECRNMK LLLKQQQRVL LGRSDVAGWG AFLKTPVNKH DYLGEYTGEL 730 740 750 760 770 780 ISHREADKRG KIYDRENSSF LFNLNDQYVL DACRKGDKLK FANHSPNPNC YAKVIMVAGD 790 800 810 820 830 HRVGIFAKER ISAGEELFYD YRYEADRAPP WARKPEDGQK NDEAASGSGR AQKTA

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377646 Genomic DNA. Translation: EFJ11553.1.
RefSeq	XP_002987466.1. XM_002987420.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ11553; EFJ11553; SELMODRAFT_446978.
GeneID	9628852.
KEGG	smo:SELMODRAFT_446978.
Phylogenomic databases
KO	K11430.
Family and domain databases
InterPro	IPR026489. CXC_dom. IPR025778. Hist-Lys_N-MeTrfase_EZ. IPR001214. SET_dom. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
SMART	SM00317. SET. 1 hit. [Graphical view]
PROSITE	PS51633. CXC. 1 hit. PS51576. SAM_MT43_EZ. 1 hit. PS50280. SET. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8SVT1_SELML

Accession

Primary (citable) accession number: D8SVT1

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	October 31, 2012
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)