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D8SVT1

- D8SVT1_SELML

UniProt

D8SVT1 - D8SVT1_SELML

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Protein
Submitted name:

Putative uncharacterized protein

Gene
SELMODRAFT_446978
Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. single-stranded RNA binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. DNA mediated transformation Source: EnsemblPlants/Gramene
  2. histone methylation Source: EnsemblPlants/Gramene
  3. leaf morphogenesis Source: EnsemblPlants/Gramene
  4. negative regulation of molecular function, epigenetic Source: EnsemblPlants/Gramene
  5. regulation of gene expression by genetic imprinting Source: EnsemblPlants/Gramene
  6. vegetative to reproductive phase transition of meristem Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_446978Imported
OrganismiSelaginella moellendorffii (Spikemoss)
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. PcG protein complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotations

Phylogenomic databases

KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8SVT1-1 [UniParc]FASTAAdd to Basket

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MQSMEEGEAS GKVSMAALSA TFTRLKKQVA FERQAYVKAR MDANSERLQG    50
FCTHLLALSS SRAVNNRNHA DNDMLNTRIQ KALNKLGTDP AAADQQCGSQ 100
DDSSAPILFN NSGGKSIVKP VRLQTVQKTP PYTTWIFLDR NQRMAEDQSV 150
VGRRRIYYDS AENEALICSD SEEEQVEEEE EKRDFSKGDD FLIRATVQEH 200
GLSKMMFKAL ADCLDAKPSE IEARYEILAK DGDKLKSEEK HDLLSAMDSF 250
DNLFCRRCLV FDCRLHGCSQ PVIIPFDKQT PLNKTGELPS VPCGPCCFHL 300
PRLSSHHDAT SSGVESKPVP VESTAPAIEK SWQVSDSKDK GVATEPVAKT 350
VDKPPEAPKK SFKDKSVTAL RRLLLKRKAT RHTDDDTNEA RKKHHVEGSH 400
AEVGDGSGNA TRGENTGASM YLKKLVSKKL YAQRKWKGSQ ITTVKRPPPV 450
IKEPEDVMQS ISKNLTLYDS NWNTLEKDLY ETGLQIFGRD SCLISRNLLR 500
GMKSCAEVGE FMQLEAAVNW KLNEETKLQQ DGNTVIEDAT EIDRSRSRLY 550
NGRRRGRVRR LKYTWKSVGY PAIRKRLVDG KDGCRQYTPC SCSESCGKQC 600
SCHRNGTCCE KYCGCSKNCK NRFRGCHCAK SQCSSRQCPC FAAGRECDPD 650
VCRNCWIGCG DGSQGGPPAR GDSYECRNMK LLLKQQQRVL LGRSDVAGWG 700
AFLKTPVNKH DYLGEYTGEL ISHREADKRG KIYDRENSSF LFNLNDQYVL 750
DACRKGDKLK FANHSPNPNC YAKVIMVAGD HRVGIFAKER ISAGEELFYD 800
YRYEADRAPP WARKPEDGQK NDEAASGSGR AQKTA 835
Length:835
Mass (Da):93,547
Last modified:October 5, 2010 - v1
Checksum:i0BBC1B6259FA826F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377646 Genomic DNA. Translation: EFJ11553.1.
RefSeqiXP_002987466.1. XM_002987420.1.

Genome annotation databases

EnsemblPlantsiEFJ11553; EFJ11553; SELMODRAFT_446978.
GeneIDi9628852.
KEGGismo:SELMODRAFT_446978.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377646 Genomic DNA. Translation: EFJ11553.1 .
RefSeqi XP_002987466.1. XM_002987420.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ11553 ; EFJ11553 ; SELMODRAFT_446978 .
GeneIDi 9628852.
KEGGi smo:SELMODRAFT_446978.

Phylogenomic databases

KOi K11430.

Family and domain databases

InterProi IPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00317. SET. 1 hit.
[Graphical view ]
PROSITEi PS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8SVT1_SELML
AccessioniPrimary (citable) accession number: D8SVT1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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