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D8SGX2

- D8SGX2_SELML

UniProt

D8SGX2 - D8SGX2_SELML

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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_116607

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. transferase activity, transferring alkyl or aryl (other than methyl) groups Source: InterPro

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_116607Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD8SGX2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiD8SGX2.
KOiK02291.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR002060. Squ/phyt_synthse.
IPR019845. Squalene/phytoene_synthase_CS.
IPR008949. Terpenoid_synth.
[Graphical view]
PfamiPF00494. SQS_PSY. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS01044. SQUALEN_PHYTOEN_SYN_1. 1 hit.
PS01045. SQUALEN_PHYTOEN_SYN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8SGX2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIADSPAALP SQQKVYDVVL KQAALVEKLG KLEKFPAIPV TNRDLLEEAY
60 70 80 90 100
TRCGEICAEY AKTFYLGTLL MTPERRKAIW AIYVWCRRTD ELVDGPNAAH
110 120 130 140 150
ITPTALDRWE QRLEDLFVGR PFDMLDGALA DTVSKYPVDI QPFRDMIEGM
160 170 180 190 200
RLDLVKSRYK NFDELYLYCY YVAGTVGLMS VPVMGIAPES NASVESVYNA
210 220 230 240 250
GLALGIANQL TNILRDVGED AGRGRVYLPQ DELAKFGLSD EDIFAGKVTN
260 270 280 290 300
KWRAFMKDQI TRARKFFKEA ELGVMELDKD SRWPVWASLL LYQQILDSIE
310 320 330 340
ANDYDNFKRR AYVGKWKKLV SLPSAYVRAI SPDVSRLVPM S
Length:341
Mass (Da):38,683
Last modified:October 5, 2010 - v1
Checksum:iCCBCEC9D0A66152B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377619 Genomic DNA. Translation: EFJ16279.1.
RefSeqiXP_002982526.1. XM_002982480.1.
UniGeneiSmo.14715.

Genome annotation databases

EnsemblPlantsiEFJ16279; EFJ16279; SELMODRAFT_116607.
GeneIDi9661276.
KEGGismo:SELMODRAFT_116607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377619 Genomic DNA. Translation: EFJ16279.1 .
RefSeqi XP_002982526.1. XM_002982480.1.
UniGenei Smo.14715.

3D structure databases

ProteinModelPortali D8SGX2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ16279 ; EFJ16279 ; SELMODRAFT_116607 .
GeneIDi 9661276.
KEGGi smo:SELMODRAFT_116607.

Phylogenomic databases

InParanoidi D8SGX2.
KOi K02291.

Family and domain databases

Gene3Di 1.10.600.10. 1 hit.
InterProi IPR002060. Squ/phyt_synthse.
IPR019845. Squalene/phytoene_synthase_CS.
IPR008949. Terpenoid_synth.
[Graphical view ]
Pfami PF00494. SQS_PSY. 1 hit.
[Graphical view ]
SUPFAMi SSF48576. SSF48576. 1 hit.
PROSITEi PS01044. SQUALEN_PHYTOEN_SYN_1. 1 hit.
PS01045. SQUALEN_PHYTOEN_SYN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8SGX2_SELML
AccessioniPrimary (citable) accession number: D8SGX2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3