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D8S9Y1

- D8S9Y1_SELML

UniProt

D8S9Y1 - D8S9Y1_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_111991

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 2-isopropylmalate synthase activity Source: InterPro

    GO - Biological processi

    1. leucine biosynthetic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_111991Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliD8S9Y1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01649.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    HAMAPiMF_01025. LeuA_type1.
    InterProiIPR013709. 2-isopropylmalate_synth_dimer.
    IPR002034. AIPM/Hcit_synth_CS.
    IPR013785. Aldolase_TIM.
    IPR005671. LeuA_bact_synth.
    IPR000891. PYR_CT.
    [Graphical view]
    PfamiPF00682. HMGL-like. 1 hit.
    PF08502. LeuA_dimer. 1 hit.
    [Graphical view]
    SMARTiSM00917. LeuA_dimer. 1 hit.
    [Graphical view]
    SUPFAMiSSF110921. SSF110921. 1 hit.
    TIGRFAMsiTIGR00973. leuA_bact. 1 hit.
    PROSITEiPS00815. AIPM_HOMOCIT_SYNTH_1. 1 hit.
    PS50991. PYR_CT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8S9Y1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDHRVIAPAP GSPAFQCKLR KSPSPSPAPW KCRVLASSSS ERQFLQRKRP    50
    IYVPSRIDDP SYVRIFDTTL RDGEQSPGAT LTSKEKLDIA RQLAKLGVDI 100
    IEAGFPIASP DDLLAVKGIA LDVGNRVDDD GYVPVICGLS RCNKADIAAA 150
    WEAVSHALRP RIHTFIATSE IHMKHKLRKS PDEVVQIATD MVGYAKSLGC 200
    QDIEFSPEDA GRSDPEFLYR ILAEVIKAGA TTLNIPDTVG YTLPSEFGRL 250
    IAMIKENTPG SQNVVISTHC QNDLGLATAN TLAGAYAGAR QLEVTINGIG 300
    ERAGNASLEE VVMAIRCRGD EQLNGLHTGI KPKHIAVTSR MVSDYTGMTV 350
    QPHKAIVGAN AFAHESGIHQ DGMLKFKGTY EIMCPEDIGL VRADEAGIVL 400
    GKHSGRHALK TRLSQLGYEL ESKKLDDVFK RFKAVADKKK SLSDVDLEAL 450
    LSDEVFQPEV VWALLDLQVV CGTLGLSTAT VKLSGPDNIQ RVGTSIGTGP 500
    VDAAYKAVDS IVQIPVTLLE YSMNAVTEGI DAIANTRVVI RAENSTPVTH 550
    AQSTEPVQRS FSGSGASEDV TVSSVRAYVS ALNKVIGFSK AVPSSESSVS 600
    ATQATTVATK 610
    Length:610
    Mass (Da):65,396
    Last modified:October 5, 2010 - v1
    Checksum:i0E0983ECC392E218
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377608 Genomic DNA. Translation: EFJ18905.1.
    RefSeqiXP_002980035.1. XM_002979989.1.
    UniGeneiSmo.15089.

    Genome annotation databases

    EnsemblPlantsiEFJ18905; EFJ18905; SELMODRAFT_111991.
    GeneIDi9647364.
    KEGGismo:SELMODRAFT_111991.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377608 Genomic DNA. Translation: EFJ18905.1 .
    RefSeqi XP_002980035.1. XM_002979989.1.
    UniGenei Smo.15089.

    3D structure databases

    ProteinModelPortali D8S9Y1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ18905 ; EFJ18905 ; SELMODRAFT_111991 .
    GeneIDi 9647364.
    KEGGi smo:SELMODRAFT_111991.

    Phylogenomic databases

    KOi K01649.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    HAMAPi MF_01025. LeuA_type1.
    InterProi IPR013709. 2-isopropylmalate_synth_dimer.
    IPR002034. AIPM/Hcit_synth_CS.
    IPR013785. Aldolase_TIM.
    IPR005671. LeuA_bact_synth.
    IPR000891. PYR_CT.
    [Graphical view ]
    Pfami PF00682. HMGL-like. 1 hit.
    PF08502. LeuA_dimer. 1 hit.
    [Graphical view ]
    SMARTi SM00917. LeuA_dimer. 1 hit.
    [Graphical view ]
    SUPFAMi SSF110921. SSF110921. 1 hit.
    TIGRFAMsi TIGR00973. leuA_bact. 1 hit.
    PROSITEi PS00815. AIPM_HOMOCIT_SYNTH_1. 1 hit.
    PS50991. PYR_CT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8S9Y1_SELML
    AccessioniPrimary (citable) accession number: D8S9Y1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3