D8S9Y1 (D8S9Y1_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFJ18905.1

Gene names

ORF Names:

SELMODRAFT_111991 EMBL EFJ18905.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome]

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	610 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	leucine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	2-isopropylmalate synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8S9Y1 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 0E0983ECC392E218	FASTA	610	65,396
	10 20 30 40 50 60 MDHRVIAPAP GSPAFQCKLR KSPSPSPAPW KCRVLASSSS ERQFLQRKRP IYVPSRIDDP 70 80 90 100 110 120 SYVRIFDTTL RDGEQSPGAT LTSKEKLDIA RQLAKLGVDI IEAGFPIASP DDLLAVKGIA 130 140 150 160 170 180 LDVGNRVDDD GYVPVICGLS RCNKADIAAA WEAVSHALRP RIHTFIATSE IHMKHKLRKS 190 200 210 220 230 240 PDEVVQIATD MVGYAKSLGC QDIEFSPEDA GRSDPEFLYR ILAEVIKAGA TTLNIPDTVG 250 260 270 280 290 300 YTLPSEFGRL IAMIKENTPG SQNVVISTHC QNDLGLATAN TLAGAYAGAR QLEVTINGIG 310 320 330 340 350 360 ERAGNASLEE VVMAIRCRGD EQLNGLHTGI KPKHIAVTSR MVSDYTGMTV QPHKAIVGAN 370 380 390 400 410 420 AFAHESGIHQ DGMLKFKGTY EIMCPEDIGL VRADEAGIVL GKHSGRHALK TRLSQLGYEL 430 440 450 460 470 480 ESKKLDDVFK RFKAVADKKK SLSDVDLEAL LSDEVFQPEV VWALLDLQVV CGTLGLSTAT 490 500 510 520 530 540 VKLSGPDNIQ RVGTSIGTGP VDAAYKAVDS IVQIPVTLLE YSMNAVTEGI DAIANTRVVI 550 560 570 580 590 600 RAENSTPVTH AQSTEPVQRS FSGSGASEDV TVSSVRAYVS ALNKVIGFSK AVPSSESSVS 610 ATQATTVATK

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377608 Genomic DNA. Translation: EFJ18905.1.
RefSeq	XP_002980035.1. XM_002979989.1.
UniGene	Smo.15089.
3D structure databases
ProteinModelPortal	D8S9Y1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ18905; EFJ18905; SELMODRAFT_111991.
GeneID	9647364.
KEGG	smo:SELMODRAFT_111991.
Phylogenomic databases
KO	K01649.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
HAMAP	MF_01025. LeuA_type1.
InterPro	IPR013709. 2-isopropylmalate_synth_dimer. IPR002034. AIPM/Hcit_synth_CS. IPR013785. Aldolase_TIM. IPR005671. LeuA_bact_synth. IPR000891. PYR_CT. [Graphical view]
Pfam	PF00682. HMGL-like. 1 hit. PF08502. LeuA_dimer. 1 hit. [Graphical view]
SMART	SM00917. LeuA_dimer. 1 hit. [Graphical view]
SUPFAM	SSF110921. 2-isopropylmalate_synth_dimer. 1 hit.
TIGRFAMs	TIGR00973. leuA_bact. 1 hit.
PROSITE	PS00815. AIPM_HOMOCIT_SYNTH_1. 1 hit. PS50991. PYR_CT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8S9Y1_SELML

Accession

Primary (citable) accession number: D8S9Y1

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	March 6, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)