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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_111860

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_111860Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. PcG protein complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

InParanoidiD8S9D0.
KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8S9D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAALSATFTR LKKQVAFERQ AYVKARMDAN SERLQGFCTH LLALSSSRAV
60 70 80 90 100
NNRNHADNDM LNTRIQKALN KLGTDPAAAD QQCGSQDDSS APILFNNSGG
110 120 130 140 150
KSIVKPVRLQ TVQKTPPYTT WIFLDRNQRM AEDQSVVGRR RIYYDSAENE
160 170 180 190 200
ALICSDSEEE QVEEEEEKRD FSKGDDFLIR ATVQEHGSSK MVFKALADCL
210 220 230 240 250
DAKPSEIEAR YEILAKDGDK LKSEEKHDLL SAMDSFDNLF CRRCLVFDCR
260 270 280 290 300
LHGCSQPVII PFDKQTPLNK TGELPSVPCG PCCFHLPRLS SHHDATSSGV
310 320 330 340 350
ESKPVPVEST APAIEKSWQV PDSKDKGVAT EPVAKTVDKP PEAPKKSFKD
360 370 380 390 400
KSVTALRRLL LKRKATRHTD DDTNEARKKH HVEGSHAEVG DGSGNATRGE
410 420 430 440 450
NTGASMYLKK LVSKKLYAQR KWKGSQITTV KRPPPVIKES EDVMQSISKN
460 470 480 490 500
LTLYDSNWNT LEKDLYETGL QIFGRDSCLI SRNLLRGMKS CAEVGEFMQL
510 520 530 540 550
EAAVNWKLNE ETKLQQDGNT VIEDATIDRS RSRLYNGRRR GRVRRLKYTW
560 570 580 590 600
KSVGYPAIRK RLVDGKDGCR QYTPCSCSES CGKQCSCHRN GTCCEKYCGC
610 620 630 640 650
SKNCKNRFRG CHCAKSQCSS RQCPCFAAGR ECDPDVCRNC WIGCGDGSQG
660 670 680 690 700
GPPARGDSYE CRNMKLLLKQ QQRVLLGRSD VAGWGAFLKT PVNKHDYLGE
710 720 730 740 750
YTGELISHRE ADKRGKIYDR ENSSFLFNLN DQYVLDACRK GDKLKFANHS
760 770 780 790 800
PNPNCYAKVI MVAGDHRVGI FAKERISAGE ELFYDYRYEA DRAPPWARKP
810 820
EDGQKNDEAA SGSGRAQKTA
Length:820
Mass (Da):91,908
Last modified:October 5, 2010 - v1
Checksum:iE4BA710E2EF3518F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377608 Genomic DNA. Translation: EFJ18941.1.
RefSeqiXP_002980071.1. XM_002980025.1.

Genome annotation databases

EnsemblPlantsiEFJ18941; EFJ18941; SELMODRAFT_111860.
GeneIDi9649613.
KEGGismo:SELMODRAFT_111860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377608 Genomic DNA. Translation: EFJ18941.1.
RefSeqiXP_002980071.1. XM_002980025.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEFJ18941; EFJ18941; SELMODRAFT_111860.
GeneIDi9649613.
KEGGismo:SELMODRAFT_111860.

Phylogenomic databases

InParanoidiD8S9D0.
KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8S9D0_SELML
AccessioniPrimary (citable) accession number: D8S9D0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.