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D8S9D0

- D8S9D0_SELML

UniProt

D8S9D0 - D8S9D0_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_111860

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_111860Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. PcG protein complex Source: InterPro

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains SET domain.SAAS annotation

    Phylogenomic databases

    KOiK11430.

    Family and domain databases

    InterProiIPR026489. CXC_dom.
    IPR025778. Hist-Lys_N-MeTrfase_EZ.
    IPR001214. SET_dom.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00317. SET. 1 hit.
    [Graphical view]
    PROSITEiPS51633. CXC. 1 hit.
    PS51576. SAM_MT43_EZ. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8S9D0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAALSATFTR LKKQVAFERQ AYVKARMDAN SERLQGFCTH LLALSSSRAV    50
    NNRNHADNDM LNTRIQKALN KLGTDPAAAD QQCGSQDDSS APILFNNSGG 100
    KSIVKPVRLQ TVQKTPPYTT WIFLDRNQRM AEDQSVVGRR RIYYDSAENE 150
    ALICSDSEEE QVEEEEEKRD FSKGDDFLIR ATVQEHGSSK MVFKALADCL 200
    DAKPSEIEAR YEILAKDGDK LKSEEKHDLL SAMDSFDNLF CRRCLVFDCR 250
    LHGCSQPVII PFDKQTPLNK TGELPSVPCG PCCFHLPRLS SHHDATSSGV 300
    ESKPVPVEST APAIEKSWQV PDSKDKGVAT EPVAKTVDKP PEAPKKSFKD 350
    KSVTALRRLL LKRKATRHTD DDTNEARKKH HVEGSHAEVG DGSGNATRGE 400
    NTGASMYLKK LVSKKLYAQR KWKGSQITTV KRPPPVIKES EDVMQSISKN 450
    LTLYDSNWNT LEKDLYETGL QIFGRDSCLI SRNLLRGMKS CAEVGEFMQL 500
    EAAVNWKLNE ETKLQQDGNT VIEDATIDRS RSRLYNGRRR GRVRRLKYTW 550
    KSVGYPAIRK RLVDGKDGCR QYTPCSCSES CGKQCSCHRN GTCCEKYCGC 600
    SKNCKNRFRG CHCAKSQCSS RQCPCFAAGR ECDPDVCRNC WIGCGDGSQG 650
    GPPARGDSYE CRNMKLLLKQ QQRVLLGRSD VAGWGAFLKT PVNKHDYLGE 700
    YTGELISHRE ADKRGKIYDR ENSSFLFNLN DQYVLDACRK GDKLKFANHS 750
    PNPNCYAKVI MVAGDHRVGI FAKERISAGE ELFYDYRYEA DRAPPWARKP 800
    EDGQKNDEAA SGSGRAQKTA 820
    Length:820
    Mass (Da):91,908
    Last modified:October 5, 2010 - v1
    Checksum:iE4BA710E2EF3518F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377608 Genomic DNA. Translation: EFJ18941.1.
    RefSeqiXP_002980071.1. XM_002980025.1.

    Genome annotation databases

    EnsemblPlantsiEFJ18941; EFJ18941; SELMODRAFT_111860.
    GeneIDi9649613.
    KEGGismo:SELMODRAFT_111860.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377608 Genomic DNA. Translation: EFJ18941.1 .
    RefSeqi XP_002980071.1. XM_002980025.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ18941 ; EFJ18941 ; SELMODRAFT_111860 .
    GeneIDi 9649613.
    KEGGi smo:SELMODRAFT_111860.

    Phylogenomic databases

    KOi K11430.

    Family and domain databases

    InterProi IPR026489. CXC_dom.
    IPR025778. Hist-Lys_N-MeTrfase_EZ.
    IPR001214. SET_dom.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00317. SET. 1 hit.
    [Graphical view ]
    PROSITEi PS51633. CXC. 1 hit.
    PS51576. SAM_MT43_EZ. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8S9D0_SELML
    AccessioniPrimary (citable) accession number: D8S9D0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3