ID   D8S7J7_SELML            Unreviewed;       630 AA.
AC   D8S7J7;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   RecName: Full=Histone deacetylase domain-containing protein {ECO:0000259|Pfam:PF00850};
DE   Flags: Fragment;
GN   ORFNames=SELMODRAFT_110614 {ECO:0000313|EMBL:EFJ19764.1};
OS   Selaginella moellendorffii (Spikemoss).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX   NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN   [1] {ECO:0000313|EMBL:EFJ19764.1, ECO:0000313|Proteomes:UP000001514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551031; DOI=10.1126/science.1203810;
RA   Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA   dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA   Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA   Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA   Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA   Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA   Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA   Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA   Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA   Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA   Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA   Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA   Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA   Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA   Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA   Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA   Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA   Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT   "The Selaginella genome identifies genetic changes associated with the
RT   evolution of vascular plants.";
RL   Science 332:960-963(2011).
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR   EMBL; GL377605; EFJ19764.1; -; Genomic_DNA.
DR   RefSeq; XP_002979356.1; XM_002979310.1.
DR   AlphaFoldDB; D8S7J7; -.
DR   STRING; 88036.D8S7J7; -.
DR   EnsemblPlants; EFJ19764; EFJ19764; SELMODRAFT_110614.
DR   Gramene; EFJ19764; EFJ19764; SELMODRAFT_110614.
DR   KEGG; smo:SELMODRAFT_110614; -.
DR   eggNOG; KOG1343; Eukaryota.
DR   HOGENOM; CLU_019490_1_0_1; -.
DR   InParanoid; D8S7J7; -.
DR   OMA; FYPAEGD; -.
DR   Proteomes; UP000001514; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0000118; C:histone deacetylase complex; IBA:GO_Central.
DR   GO; GO:0004407; F:histone deacetylase activity; IBA:GO_Central.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   Gene3D; 3.10.490.10; Gamma-glutamyl cyclotransferase-like; 1.
DR   Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR   InterPro; IPR000286; His_deacetylse.
DR   InterPro; IPR023801; His_deacetylse_dom.
DR   InterPro; IPR037138; His_deacetylse_dom_sf.
DR   InterPro; IPR023696; Ureohydrolase_dom_sf.
DR   PANTHER; PTHR10625:SF37; HISTONE DEACETYLASE 18-RELATED; 1.
DR   PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR   Pfam; PF00850; Hist_deacetyl; 1.
DR   PRINTS; PR01270; HDASUPER.
DR   SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT   DOMAIN          24..326
FT                   /note="Histone deacetylase"
FT                   /evidence="ECO:0000259|Pfam:PF00850"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EFJ19764.1"
SQ   SEQUENCE   630 AA;  69284 MW;  59519DAABCBAAF3B CRC64;
     RAMAVGLVYD RRMCAHRDPF NKLHPEQPAR ITAIWKRLED AGVLDRCVRV DARPATAEEL
     ATVHTDRHIE KMSSVSSRAY GKEGRAALAR RYNSIYFNDG SSESALLAAG SVVELSLKVA
     RGELASAAAI VRPPGHHAEA DEAMGFCLFN NVAVAAQILS SGKVSVAGSH KVLIVDWDVH
     HGNGTQNMFW QDPNVLYFSV HRYDDGYFYP GGQEGNFDKV GGGAGAGFNI NVPWPRGGYS
     DADYVAVWEH VLMPVAREFN PDIVLISGGF DSARGDPLGG CKLTPLGYSI MTQELMQLAG
     GKIVLALEGG YNLESIAESY LACVQVLLGD IQSERHDIER AYESTWTIID KVRQELCQYW
     PVLREKIEMP ASRSSPPKAF ERLTTEADAV EETHDGEVFV RSETVEIVQI SVSSEVSSPH
     SPSPYIWYAT YGSNMWPARL MCYIQGGKVE GIEVPGQGLL EKTPPLEDFW LSAPHRLFFG
     RERSLSWGNG GVAFLNPVPS DGDNCHLRAY KITLEQFNGI LAQENRLDSM AASGLVSPSH
     FETLKSSPHI VDFIENAWYG SVLYLGDKNG APILTITCSQ RDAKRFECGE LPTRAPSVAY
     QNTLINGLLE KGDLSHEQIL AYVTSRAPRS
//