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D8S7J7

- D8S7J7_SELML

UniProt

D8S7J7 - D8S7J7_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_110614

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_110614Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliD8S7J7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK11407.

    Family and domain databases

    Gene3Di3.40.800.20. 1 hit.
    InterProiIPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF00850. Hist_deacetyl. 1 hit.
    [Graphical view]
    PRINTSiPR01270. HDASUPER.

    Sequencei

    Sequence statusi: Fragment.

    D8S7J7-1 [UniParc]FASTAAdd to Basket

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    RAMAVGLVYD RRMCAHRDPF NKLHPEQPAR ITAIWKRLED AGVLDRCVRV    50
    DARPATAEEL ATVHTDRHIE KMSSVSSRAY GKEGRAALAR RYNSIYFNDG 100
    SSESALLAAG SVVELSLKVA RGELASAAAI VRPPGHHAEA DEAMGFCLFN 150
    NVAVAAQILS SGKVSVAGSH KVLIVDWDVH HGNGTQNMFW QDPNVLYFSV 200
    HRYDDGYFYP GGQEGNFDKV GGGAGAGFNI NVPWPRGGYS DADYVAVWEH 250
    VLMPVAREFN PDIVLISGGF DSARGDPLGG CKLTPLGYSI MTQELMQLAG 300
    GKIVLALEGG YNLESIAESY LACVQVLLGD IQSERHDIER AYESTWTIID 350
    KVRQELCQYW PVLREKIEMP ASRSSPPKAF ERLTTEADAV EETHDGEVFV 400
    RSETVEIVQI SVSSEVSSPH SPSPYIWYAT YGSNMWPARL MCYIQGGKVE 450
    GIEVPGQGLL EKTPPLEDFW LSAPHRLFFG RERSLSWGNG GVAFLNPVPS 500
    DGDNCHLRAY KITLEQFNGI LAQENRLDSM AASGLVSPSH FETLKSSPHI 550
    VDFIENAWYG SVLYLGDKNG APILTITCSQ RDAKRFECGE LPTRAPSVAY 600
    QNTLINGLLE KGDLSHEQIL AYVTSRAPRS 630
    Length:630
    Mass (Da):69,284
    Last modified:October 5, 2010 - v1
    Checksum:i59519DAABCBAAF3B
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377605 Genomic DNA. Translation: EFJ19764.1.
    RefSeqiXP_002979356.1. XM_002979310.1.

    Genome annotation databases

    EnsemblPlantsiEFJ19764; EFJ19764; SELMODRAFT_110614.
    GeneIDi9660401.
    KEGGismo:SELMODRAFT_110614.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377605 Genomic DNA. Translation: EFJ19764.1 .
    RefSeqi XP_002979356.1. XM_002979310.1.

    3D structure databases

    ProteinModelPortali D8S7J7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ19764 ; EFJ19764 ; SELMODRAFT_110614 .
    GeneIDi 9660401.
    KEGGi smo:SELMODRAFT_110614.

    Phylogenomic databases

    KOi K11407.

    Family and domain databases

    Gene3Di 3.40.800.20. 1 hit.
    InterProi IPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF00850. Hist_deacetyl. 1 hit.
    [Graphical view ]
    PRINTSi PR01270. HDASUPER.
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8S7J7_SELML
    AccessioniPrimary (citable) accession number: D8S7J7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3