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D8S6G0

- D8S6G0_SELML

UniProt

D8S6G0 - D8S6G0_SELML

Protein

Elongation factor Tu

Gene

SELMODRAFT_153081

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: EnsemblPlants/Gramene
    2. cobalt ion binding Source: EnsemblPlants/Gramene
    3. GTPase activity Source: InterPro
    4. GTP binding Source: UniProtKB-KW
    5. translation elongation factor activity Source: UniProtKB-KW
    6. zinc ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. response to cadmium ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Elongation factorUniRule annotation

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Gene namesi
    ORF Names:SELMODRAFT_153081Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. cell wall Source: EnsemblPlants/Gramene
    2. intracellular Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD8S6G0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8S6G0-1 [UniParc]FASTAAdd to Basket

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    MATFTRTKPH MNIGTIGHVD HGKTTLTAAI TKVLASEGRA KAIAFEDIDK    50
    APEERKRGIT ISAAHVEYET ANRHYGHVDC PGHADYVKNM ITGAAQMDGG 100
    ILVVSAPDGP MPQTKEHILL ARQVGVPSLV CFLNKVDAVE DEELLELVEM 150
    ELRELLSFYK FPGDDIPIIR GSALQALQGT NDETGKNSIL KLMEAVDTYI 200
    PEPKRVLDKP FLLAVEDVFS IQGRGTVATG RIEQGVIKVG EEVEIVGLKE 250
    SGPQKSVVTG VEMFKKILDQ GQAGDNVGLL LRGLKREDIS RGQVICKPGT 300
    IKTYKKFEAE IYVLSKDEGG RHTPFFSNYR PQFYLRTADV TGTITLPENV 350
    KMVMPGDNVS LKFELRVPAP IEAGQRFALR EGGRTVGAGV ISKVIPG 397
    Length:397
    Mass (Da):43,303
    Last modified:October 5, 2010 - v1
    Checksum:i9A92BCA05E72DE6B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377604 Genomic DNA. Translation: EFJ20057.1.
    RefSeqiXP_002979100.1. XM_002979054.1.
    UniGeneiSmo.12349.

    Genome annotation databases

    EnsemblPlantsiEFJ20057; EFJ20057; SELMODRAFT_153081.
    GeneIDi9659605.
    KEGGismo:SELMODRAFT_153081.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377604 Genomic DNA. Translation: EFJ20057.1 .
    RefSeqi XP_002979100.1. XM_002979054.1.
    UniGenei Smo.12349.

    3D structure databases

    ProteinModelPortali D8S6G0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ20057 ; EFJ20057 ; SELMODRAFT_153081 .
    GeneIDi 9659605.
    KEGGi smo:SELMODRAFT_153081.

    Phylogenomic databases

    KOi K02358.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8S6G0_SELML
    AccessioniPrimary (citable) accession number: D8S6G0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3