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D8S6G0 (D8S6G0_SELML) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu RuleBase RU004061
Gene names
ORF Names:SELMODRAFT_153081 EMBL EFJ20057.1
OrganismSelaginella moellendorffii (Spikemoss) [Complete proteome]
Taxonomic identifier88036 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325

Ontologies

Keywords
   Biological processProtein biosynthesis
   LigandGTP-binding RuleBase RU000323
Nucleotide-binding
   Molecular functionElongation factor RuleBase RU000325
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processresponse to cadmium ion

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentcell wall

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

intracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

GTP binding

Inferred from electronic annotation. Source: UniProtKB-KW

GTPase activity

Inferred from electronic annotation. Source: InterPro

cobalt ion binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

translation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

zinc ion binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8S6G0 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 9A92BCA05E72DE6B

FASTA39743,303
        10         20         30         40         50         60 
MATFTRTKPH MNIGTIGHVD HGKTTLTAAI TKVLASEGRA KAIAFEDIDK APEERKRGIT 

        70         80         90        100        110        120 
ISAAHVEYET ANRHYGHVDC PGHADYVKNM ITGAAQMDGG ILVVSAPDGP MPQTKEHILL 

       130        140        150        160        170        180 
ARQVGVPSLV CFLNKVDAVE DEELLELVEM ELRELLSFYK FPGDDIPIIR GSALQALQGT 

       190        200        210        220        230        240 
NDETGKNSIL KLMEAVDTYI PEPKRVLDKP FLLAVEDVFS IQGRGTVATG RIEQGVIKVG 

       250        260        270        280        290        300 
EEVEIVGLKE SGPQKSVVTG VEMFKKILDQ GQAGDNVGLL LRGLKREDIS RGQVICKPGT 

       310        320        330        340        350        360 
IKTYKKFEAE IYVLSKDEGG RHTPFFSNYR PQFYLRTADV TGTITLPENV KMVMPGDNVS 

       370        380        390 
LKFELRVPAP IEAGQRFALR EGGRTVGAGV ISKVIPG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL377604 Genomic DNA. Translation: EFJ20057.1.
RefSeqXP_002979100.1. XM_002979054.1.
UniGeneSmo.12349.

3D structure databases

ProteinModelPortalD8S6G0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsEFJ20057; EFJ20057; SELMODRAFT_153081.
GeneID9659605.
KEGGsmo:SELMODRAFT_153081.

Phylogenomic databases

KOK02358.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8S6G0_SELML
AccessionPrimary (citable) accession number: D8S6G0
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)