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D8S4X1

- D8S4X1_SELML

UniProt

D8S4X1 - D8S4X1_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_152569

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_152569Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8S4X1-1 [UniParc]FASTAAdd to Basket

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    MQTAAASAPR SVPLSRLTDN FLDGTSSVYL EELQRAWEAD PKSVDESWDN    50
    FFQNFTGKAA SSPGVSGQTI QESMRLLLLV RAYQVNGHMK AKLDPLGLDE 100
    RVPPEDLNPA LYGFTEADLD REFFIGVWRM SGFLSENRPV QTLRAILKRL 150
    EQAYCGTIGY EYMHISDREK CNWLREKIEQ HVPSKYSKER QITILDRLIW 200
    GTKFENFLAQ KWTAKRFGLE GCETLIPGMK EQIDRAADLG VESVVIGMPH 250
    RGRLNVLGNV VRKPLRQIFS EFAGGTKPAE SGYSGSGDVK YHLGTSYDRP 300
    TRTGKHIHLS LVANPSHLEA VDPVVVGKTR AKQYYSDDYE RKKNMAILLH 350
    GDGSFSGQGV VYETLHLSDL PNYTTGGTIH IVVNNQVAFT TDPRSSRSSP 400
    YCTDVAKALN APIFHVNGDD VEAVVHACEL AAEWRCQFKA DVVVDIVCYR 450
    RFGHNEIDEP SFTQPKMYQV IKNHPTSLEL YEKKLIESGQ ISEETVKKIH 500
    DKVYGILSEE FESSKDYVPK TQDWLAAYWS GFKSPEQLSR LRNTGVKPEV 550
    LKNVGKKITT LPPSFTAHRA IKRVYEQRAQ MIETGDGVDW ATAEALAFAT 600
    LLAEGNHVRL SGQDVERGTF SHRHAVVHDQ ETGERYCPLD HVVTNQKEEM 650
    FTVSNSSLSE FGVLGFELGY SMENPNSLVC WEAQFGDFSN GAQVIFDQFL 700
    SSGEAKWLRQ TGLVCMLPHG YDGQGPEHSS ARLERFLQMS DDHPFVIPEM 750
    EVSLRKQIQE CNWQVVNVTT PANYFHVLRR QLHRDFRKPL IIMSPKNLLR 800
    HSSCRSNLSE FDDVQGHPGF DKQGTRFKRL IKDKNDHGTV EPEIRRLVLC 850
    SGKVYYELDE ERERVGAKDV AICRVEQLCP VPYDLLQREL KRYPNADVVW 900
    CQEEPMNMGA FSYIAPRLGT AMLSVNRGSF GDIKYVGRPP SAATATGFAA 950
    VHKMEQTELV QKALQAQKM 969
    Length:969
    Mass (Da):109,484
    Last modified:October 5, 2010 - v1
    Checksum:i0C4D6FE589684BF4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377602 Genomic DNA. Translation: EFJ20348.1.
    RefSeqiXP_002978362.1. XM_002978316.1.
    UniGeneiSmo.2540.

    Genome annotation databases

    EnsemblPlantsiEFJ20348; EFJ20348; SELMODRAFT_152569.
    GeneIDi9653666.
    KEGGismo:SELMODRAFT_152569.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377602 Genomic DNA. Translation: EFJ20348.1 .
    RefSeqi XP_002978362.1. XM_002978316.1.
    UniGenei Smo.2540.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ20348 ; EFJ20348 ; SELMODRAFT_152569 .
    GeneIDi 9653666.
    KEGGi smo:SELMODRAFT_152569.

    Phylogenomic databases

    KOi K00164.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8S4X1_SELML
    AccessioniPrimary (citable) accession number: D8S4X1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3