D8S0K4 (D8S0K4_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFJ21944.1

Gene names

ORF Names:

SELMODRAFT_232856 EMBL EFJ21944.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome]

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	412 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat SAAS SAAS001330
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	negative regulation of abscisic acid mediated signaling pathway Inferred from electronic annotation. Source: EnsemblPlants/Gramene protein farnesylation Inferred from electronic annotation. Source: InterPro regulation of cell proliferation Inferred from electronic annotation. Source: InterPro regulation of meristem structural organization Inferred from electronic annotation. Source: EnsemblPlants/Gramene response to abscisic acid stimulus Inferred from electronic annotation. Source: EnsemblPlants/Gramene response to water deprivation Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	protein farnesyltransferase complex Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	protein farnesyltransferase activity Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8S0K4 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: B20BA713BBBCA7E8	FASTA	412	45,330
	10 20 30 40 50 60 MSATTREQKA LEAKVSDVFR SFASAGYRNR AFLSELWREE HLDYLLKGMT RLPASFTVLD 70 80 90 100 110 120 SSRPWLCYWI VHSMALLDRQ LDPALQTDTI EFLKHCKDPL GGYGGGPGQI AHLATTYAAV 130 140 150 160 170 180 GTLVSIGGAQ ALSSIDREKI LEFLLRMKDP SSGGFRLHDG GEMDVRGCYT AISVAYLLNI 190 200 210 220 230 240 LVPPLLEKLG EYVASCQTYE GGIGGEPGAE AHGGYTYCGL AALIMADQVD SLDLPGLLNW 250 260 270 280 290 300 AAFRQGKVEG GFQGRTNKLV DGCYSFWQGG VFPLLQQVVT KLISQQTSGS SIMHEEIEDD 310 320 330 340 350 360 SDTEIGVRKA RNQQHRPFHN PTALQGYILL CCQVLNGGLI DKPGKSKDYY HTCYCLSGLS 370 380 390 400 410 TAQHCLSTNP EDHPPSSHVF GPYSNLLDST HPLLNFHMKR YMEAVDYFVS KA

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377597 Genomic DNA. Translation: EFJ21944.1.
RefSeq	XP_002976834.1. XM_002976788.1.
UniGene	Smo.6592.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ21944; EFJ21944; SELMODRAFT_232856.
GeneID	9638415.
KEGG	smo:SELMODRAFT_232856.
Phylogenomic databases
KO	K05954.
Family and domain databases
InterPro	IPR026872. FTB. IPR001330. Prenyltrans. IPR008930. Terpenoid_cyclase/PrenylTrfase. [Graphical view]
PANTHER	PTHR11774:SF6. PTHR11774:SF6. 1 hit.
Pfam	PF00432. Prenyltrans. 1 hit. [Graphical view]
SUPFAM	SSF48239. Terp_cyc_toroid. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8S0K4_SELML

Accession

Primary (citable) accession number: D8S0K4

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	January 9, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)