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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_443218

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. phosphoenolpyruvate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_443218Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514 Componenti: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiD8RZK7.
KOiK01595.
OMAiIQIPTER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8RZK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDTTDDIAE EISFQSFEDD CHLLGNLLND CLQREVGHEF TEKVERLRVL
60 70 80 90 100
AQSACNMRAA GVDDASEWLS RKLRDELENM SSEEAVPLTR AFSHYLNLMG
110 120 130 140 150
IAETHHRVRR NRSTPVLSKS CDDVFEKLIQ TGYSREEVYE AVCKQEVEIV
160 170 180 190 200
LTAHPTQINR RTLQYKHVRI EHLLERNDRP DLTHEEKEQV YEDLVREITA
210 220 230 240 250
LWQTDELRRR KPTPVDEARA GLHIVEQSLW KSVPQYLRRV STALKKHTGK
260 270 280 290 300
PLPLCCTPIK FGSWMGGDRD GNPNVTAKVT KDVCLLAKWI GADLYLRELD
310 320 330 340 350
ALKFELSMSN GNEKLIRMAY QVLSEEHGQT EEHHRSHARH TEHHNFALPV
360 370 380 390 400
HLPAGADMCA STEVDGEAQL PSLKLPFNQQ TYQALTAKEA TSSPRAVKTE
410 420 430 440 450
TENGLPPTPV TPRKKPGSEV RSSLEKLLNP GLEARHMDSP YRIVLGHVRD
460 470 480 490 500
KIFSTRRRLE DILNGLPTDY EPGQYYESAD QLLEPLLLCH ESLQSCGSDV
510 520 530 540 550
LADGKLADLI RRVATFGLTL MKLDLRQEAD KHTEALNAVT EFLEMGTYSQ
560 570 580 590 600
WDEEKKLDFL TSELKGKRPL LPPSIEVSRE VQEVLDTFRV AAELGSNSLE
610 620 630 640 650
AYVISMASEA SDVLAVELLQ KEARLIVSGE QGRPCPTGSL RVVPLFETVK
660 670 680 690 700
DLRDAGTVIR KLLRIDWYRA HLIANHDGHQ EVMLGYSDSG KDAGRFSAAW
710 720 730 740 750
ELYKAQEDVV AACKEHNIKV TLFHGRGGSV GRGGGPTYLA IQSQPPGSVM
760 770 780 790 800
GSLRVTEQGE MVQAKFGVPQ TAVRQLEIYT TAVLLATLNP PDPPRSENWR
810 820 830 840 850
LIMEEISDAS CTNYRDVVFK NEHFIPYFHE ATPEAELGNL NIGSRPTRRK
860 870 880 890 900
KAGGISQLRA IPWIFAWTQT RFVLPAWLGV GAGLEKVFLE GHKEELQAMY
910 920 930 940 950
REWPFFQSTI DLIEMVLAKA DPSIAKYYDD VLVSSAARKE LGEELRQAFH
960 970 980 990 1000
TTAKYVQELS GHQKLIENNK TLRRLVESRL PYLNPMNMLQ VEVLRRLRQD
1010 1020
ENNQKLRDAL LITINGIAAG MRNTG
Length:1,025
Mass (Da):115,841
Last modified:October 4, 2010 - v1
Checksum:i7AA343D788C21515
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377596 Genomic DNA. Translation: EFJ22170.1.
RefSeqiXP_002976501.1. XM_002976455.1.
UniGeneiSmo.15080.

Genome annotation databases

EnsemblPlantsiEFJ22170; EFJ22170; SELMODRAFT_443218.
GeneIDi9649384.
KEGGismo:SELMODRAFT_443218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377596 Genomic DNA. Translation: EFJ22170.1.
RefSeqiXP_002976501.1. XM_002976455.1.
UniGeneiSmo.15080.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEFJ22170; EFJ22170; SELMODRAFT_443218.
GeneIDi9649384.
KEGGismo:SELMODRAFT_443218.

Phylogenomic databases

InParanoidiD8RZK7.
KOiK01595.
OMAiIQIPTER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8RZK7_SELML
AccessioniPrimary (citable) accession number: D8RZK7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 4, 2010
Last sequence update: October 4, 2010
Last modified: January 6, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.