D8RU12 (D8RU12_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein SDG33-1 EMBL EFJ24125.1

Gene names

Name:	SDG33-1 EMBL EFJ24125.1
ORF Names:	SELMODRAFT_232379 EMBL EFJ24125.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome]

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	580 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS007728 S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine.
Subcellular location	Nucleus By similarity.
Sequence similarities	Contains 1 SET domain. SAAS SAAS007728 RuleBase RU004538 Contains 1 post-SET domain. SAAS SAAS001214 RuleBase RU004541 Contains 1 pre-SET domain.

Ontologies

Keywords
Cellular component	Chromosome SAAS SAAS007728 Nucleus RuleBase RU004542 SAAS SAAS007728
Molecular function	Methyltransferase RuleBase RU004542 RuleBase RU004541 SAAS SAAS007728 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	maintenance of DNA methylation Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	chromosome Inferred from electronic annotation. Source: UniProtKB-KW nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	double-stranded methylated DNA binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene histone methyltransferase activity (H3-K9 specific) Inferred from electronic annotation. Source: EnsemblPlants/Gramene methyl-CpG binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene methyl-CpNpG binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene methyl-CpNpN binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8RU12 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 539F27772F1C6A99	FASTA	580	64,365
	10 20 30 40 50 60 MRLKTPGMSA DLADLAKVGA EGDVDVENGQ ALSKSGNFVL GDAAKVKNNL RIFNMCYLQA 70 80 90 100 110 120 IKEEQERCKK MRNASQRPDL KAISKMLRMN AILFPEKRIG DLPGVKVGDT FFSRAELVSV 130 140 150 160 170 180 GIHKHWINGI DYIGKGGNDH KTYNLPLAIS IVMSGGYEDD VDNSDDVIYT GQGGNNLAGD 190 200 210 220 230 240 RRQMQHQEMK RGNLALKNSI EEGNPVRVIR GHDLRHSYTK RVYTYDGLYK VVDYWAERGI 250 260 270 280 290 300 SGFKVYKFKL RRCEGQPALT TEQVRFCRGK LPVAPSERGL VCKDISNGLE VLPVPVSNLV 310 320 330 340 350 360 DNPPCAPDGY RYINKIEIDD GIVLPPPALG CSCKGLCVDP KICSCAKRNG HTFPYVDSHG 370 380 390 400 410 420 GRLAVPLDAV YECGPNCGCG PACINRVTQR GLRYRLEVYK TQHKGWAVRS WDSIPAGAPV 430 440 450 460 470 480 CEYFGKVIKS DSLDVKSDVY LFDLDCIQTM RGVDGRQRRW GDLNKFLDDQ NGKVSCESKD 490 500 510 520 530 540 AEDAEHHGQA EFCLDGGECG AVARFINHSC EPNLFIQCVL STHHDMRIPR IVLFAADNIA 550 560 570 580 PLQELSYDYG YALNSVVDSD GLVKKLPCYC GALSCRKRLY

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377590 Genomic DNA. Translation: EFJ24125.1.
RefSeq	XP_002974605.1. XM_002974559.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ24125; EFJ24125; SELMODRAFT_232379.
GeneID	9637374.
KEGG	smo:SELMODRAFT_232379.
Phylogenomic databases
KO	K11420.
Family and domain databases
Gene3D	2.30.280.10. 1 hit.
InterPro	IPR025794. Hist-Lys_N-MeTrfase_plant. IPR003616. Post-SET_dom. IPR007728. Pre-SET_dom. IPR001214. SET_dom. IPR003105. SRA_YDG. [Graphical view]
Pfam	PF05033. Pre-SET. 1 hit. PF00856. SET. 1 hit. PF02182. YDG_SRA. 1 hit. [Graphical view]
SMART	SM00508. PostSET. 1 hit. SM00317. SET. 1 hit. SM00466. SRA. 1 hit. [Graphical view]
PROSITE	PS50868. POST_SET. 1 hit. PS50867. PRE_SET. 1 hit. PS51575. SAM_MT43_SUVAR39_2. 1 hit. PS50280. SET. 1 hit. PS51015. YDG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8RU12_SELML

Accession

Primary (citable) accession number: D8RU12

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	March 6, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)