SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D8RT63

- D8RT63_SELML

UniProt

D8RT63 - D8RT63_SELML

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Superoxide dismutase [Cu-Zn]
Gene
SELMODRAFT_271798, SELMODRAFT_442405
Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC

GO - Biological processi

  1. cellular response to UV-B Source: EnsemblPlants/Gramene
  2. cellular response to copper ion Source: EnsemblPlants/Gramene
  3. cellular response to light intensity Source: EnsemblPlants/Gramene
  4. cellular response to ozone Source: EnsemblPlants/Gramene
  5. cellular response to salt stress Source: EnsemblPlants/Gramene
  6. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
  7. defense response to bacterium Source: EnsemblPlants/Gramene
  8. gene silencing by miRNA Source: EnsemblPlants/Gramene
  9. response to iron ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:SELMODRAFT_271798Imported, SELMODRAFT_442405Imported
OrganismiSelaginella moellendorffii (Spikemoss)
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8RT63-1 [UniParc]FASTAAdd to Basket

« Hide

MAPLKAVAVL AGTGVSGVVS FVEDGEGTTV SGKITGLVAG EHGFHVHALG    50
DTTNGCLSTG AHFNPNNLEH GDPSDKIRHA GDLGNVTAGP DGVAEFVIKD 100
KQIPLAGANS IVGRAVVVHA DRDDLGKGGH ELSKSTGNAG GRLACGVIGL 150
QASA 154
Length:154
Mass (Da):15,265
Last modified:October 5, 2010 - v1
Checksum:i750FC089BD161709
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377634 Genomic DNA. Translation: EFJ13179.1.
GL377589 Genomic DNA. Translation: EFJ24454.1.
RefSeqiXP_002974232.1. XM_002974186.1.
XP_002985601.1. XM_002985555.1.
UniGeneiSmo.15148.
Smo.5976.

Genome annotation databases

EnsemblPlantsiEFJ13179; EFJ13179; SELMODRAFT_271798.
EFJ24454; EFJ24454; SELMODRAFT_442405.
GeneIDi9653800.
9658067.
KEGGismo:SELMODRAFT_271798.
smo:SELMODRAFT_442405.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377634 Genomic DNA. Translation: EFJ13179.1 .
GL377589 Genomic DNA. Translation: EFJ24454.1 .
RefSeqi XP_002974232.1. XM_002974186.1.
XP_002985601.1. XM_002985555.1.
UniGenei Smo.15148.
Smo.5976.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ13179 ; EFJ13179 ; SELMODRAFT_271798 .
EFJ24454 ; EFJ24454 ; SELMODRAFT_442405 .
GeneIDi 9653800.
9658067.
KEGGi smo:SELMODRAFT_271798.
smo:SELMODRAFT_442405.

Phylogenomic databases

KOi K04565.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
PRINTSi PR00068. CUZNDISMTASE.
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8RT63_SELML
AccessioniPrimary (citable) accession number: D8RT63
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi