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D8RQ18

- D8RQ18_SELML

UniProt

D8RQ18 - D8RQ18_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_148941

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphoenolpyruvate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_148941Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Family & Domainsi

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 2 hits.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 2 hits.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8RQ18-1 [UniParc]FASTAAdd to Basket

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    MIDTTDDIAE EISFQSFEDD CHLLGNLLND CLQREVGHEF TEKVERLRVL     50
    AQSACNMRAA GVDDASEWLS RKLRDELENM SSEEAVPLTR AFSHYLNLMG 100
    IAETHHRVRR NRSTPVLSKS CDDVFEKLIQ TGYSREEVYE AVCKQEVEIV 150
    LTAHPTQINR RTLQYKHVRI EHLLERNDRP DLTHEEKEQV YEDLVREITA 200
    LWQTDELRRR KPTPVDEARA GLHIVEQSLW KSVPQYLRRV STALKKHTGK 250
    PLPLCCTPIK FGSWMGGDRD GNPNVTAKVT KDVCLLAKWI AADLYLRELD 300
    ALKFELSMSN GNEKLIRMAY QVLSEEHGQT EEHHRSHARH TEHHNFALPV 350
    HLPAGADIPE VDGEAQLPSL KLPFNQQTYQ VHLCALTSKE ATSSPRAVKT 400
    ETENGLPPTP VTPRKKPGSE VRSSLEKLLN PGLEARHMDS PYRIVLGHVR 450
    DKIFSTRRRL EDILNGLPTD YEPGQYYESA DQLLEPLLLC HESLQSCGSD 500
    VLADGKLADL IRRVATFGLT LMKLDLRQEA DKHTEALNAV TEFLEMGTYS 550
    QWDEEKKLDF LISELKGKRP LLPPSIEVSR EVQEVLDTFR VAAELGSNSL 600
    EAYVISMASE ASDVLAVELL QKEARLIVSG EQGRPCPTGS LRVVPLFETV 650
    KDLRDAGTVI RKLLRIDWYR AHLIANHDGH QEVMLGYSDS GKDAGRFSAA 700
    WELYKAQEDV VAACKEHNIK ITLFHGRGGS VGRGGGPTYL AIQSQPPGSV 750
    MGSLRVTEQG EMVQAKFGVP QTAVRQLEIY TTAVLLATLN PPDPPRSENW 800
    RLIMEEISDA SCTNYRDVVF KNEHFIPYFH EATPEAELGN LNIGSRPTRR 850
    KKAGGISQLR AIPWIFAWTQ TRFVLPAWLG VGAGLEKVFL EGHKEELQAM 900
    YREWPFFQST IDLIEMVLAK ADPSIAKYYD DVLVSSAARK DLGEELRQAF 950
    HTTAKYVQEL SGHQKLIENN KTLRRLVESR LPYLNPMNML QVEVLRRLRQ 1000
    DENNQKLRDA LLITINGIAA GMRNTG 1026
    Length:1,026
    Mass (Da):116,052
    Last modified:October 5, 2010 - v1
    Checksum:i749453CB526226C0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377586 Genomic DNA. Translation: EFJ25780.1.
    RefSeqiXP_002973406.1. XM_002973360.1.
    UniGeneiSmo.3031.

    Genome annotation databases

    EnsemblPlantsiEFJ25780; EFJ25780; SELMODRAFT_148941.
    GeneIDi9641675.
    KEGGismo:SELMODRAFT_148941.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377586 Genomic DNA. Translation: EFJ25780.1 .
    RefSeqi XP_002973406.1. XM_002973360.1.
    UniGenei Smo.3031.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ25780 ; EFJ25780 ; SELMODRAFT_148941 .
    GeneIDi 9641675.
    KEGGi smo:SELMODRAFT_148941.

    Phylogenomic databases

    KOi K01595.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 2 hits.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 2 hits.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8RQ18_SELML
    AccessioniPrimary (citable) accession number: D8RQ18
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3