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D8RP07

- D8RP07_SELML

UniProt

D8RP07 - D8RP07_SELML

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Protein
Submitted name:

Putative uncharacterized protein CUL3-1

Gene
CUL3-1, CUL3-2, SELMODRAFT_136955, SELMODRAFT_98006
Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Biological processi

  1. embryo development ending in seed dormancy Source: EnsemblPlants/Gramene
  2. endosperm development Source: EnsemblPlants/Gramene
  3. positive regulation of flower development Source: EnsemblPlants/Gramene
  4. response to red or far red light Source: EnsemblPlants/Gramene
  5. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein CUL3-1Imported
Submitted name:
Putative uncharacterized protein CUL3-2Imported
Gene namesi
Name:CUL3-1Imported
Synonyms:CUL3-2Imported
ORF Names:SELMODRAFT_136955Imported, SELMODRAFT_98006Imported
OrganismiSelaginella moellendorffii (Spikemoss)
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. cullin-RING ubiquitin ligase complex Source: InterPro
  2. cytosol Source: EnsemblPlants/Gramene
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the cullin family.UniRule annotation

Phylogenomic databases

KOiK03869.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS50069. CULLIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8RP07-1 [UniParc]FASTAAdd to Basket

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MSQPKKKPFK IEPFKHKVEM DPRYAEKTWK ILEDAIHEIY NRNASGLSFE    50
ELYRNAYNMV LHKYGEKLYA GLETTMTQHL QEFSRVIEAA QGGLFLEELN 100
GKWSEHNKAL QMIRDILMYM DRTYVQNSSK TPVHELGLNL WRDTIVRCPT 150
IKDRLRDTLL DLVHRERTGE VINRGLMRNI TKMLMDLGVA VYEEEFEKPF 200
LDAAADFYRI ESQQFLESSD CADYLKKAER RLNEEMDRVT HYLFPRSEPK 250
ITSVVDREMI GHHMKLLVEM ENSGLVSMLT DDKYDDLARM YSLFRRVTTG 300
LQTIRDLMTS HLREVGKNLV VDPERLKDPV EFVQRLLDEK DKYDRIIRSS 350
FSNDKTFQNA LNSAFEYFIN LNARSPEFIS LFVDDKLRKG LKGVSEEDIE 400
TVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGRTISDD AERSLIVKLK 450
TECGYQFTSK LEGMFTDMKT SRDTMQGFSS MMANCEQPGE APTLSVQVLT 500
TGSWPTQSGA RCNLPTEILS VCDKFKTYYL STHTGRRLTW QTNMGTADLK 550
ATFGNGARHE LNVSTYQMCV LMLFNMADKV TYREIEQATD IPAADLKRCL 600
QSLALVKGKN VLRKEPMSKD INEDDVFLFN DKFASKLYKV KISTVVAQKE 650
SEPEKQETRQ KVEEDRKPQI EAAIVRIMKS RRVLDHNNIV SEVTKQLQAR 700
FLPNPAVIKK RIESLIEREF LERDKVDRKL YRYLA 735
Length:735
Mass (Da):85,736
Last modified:October 5, 2010 - v1
Checksum:iDA3B9CC8B7EA7E74
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377719 Genomic DNA. Translation: EFJ05563.1.
GL377585 Genomic DNA. Translation: EFJ26179.1.
RefSeqiXP_002972958.1. XM_002972912.1.
XP_002993378.1. XM_002993332.1.
UniGeneiSmo.12491.

Genome annotation databases

EnsemblPlantsiEFJ05563; EFJ05563; SELMODRAFT_136955.
EFJ26179; EFJ26179; SELMODRAFT_98006.
GeneIDi9637298.
9640937.
KEGGismo:SELMODRAFT_136955.
smo:SELMODRAFT_98006.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377719 Genomic DNA. Translation: EFJ05563.1 .
GL377585 Genomic DNA. Translation: EFJ26179.1 .
RefSeqi XP_002972958.1. XM_002972912.1.
XP_002993378.1. XM_002993332.1.
UniGenei Smo.12491.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ05563 ; EFJ05563 ; SELMODRAFT_136955 .
EFJ26179 ; EFJ26179 ; SELMODRAFT_98006 .
GeneIDi 9637298.
9640937.
KEGGi smo:SELMODRAFT_136955.
smo:SELMODRAFT_98006.

Phylogenomic databases

KOi K03869.

Family and domain databases

Gene3Di 1.10.10.10. 2 hits.
InterProi IPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view ]
SMARTi SM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view ]
SUPFAMi SSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEi PS50069. CULLIN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8RP07_SELML
AccessioniPrimary (citable) accession number: D8RP07
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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