D8RP07 (D8RP07_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein CUL3-1 EMBL EFJ26179.1

Submitted name:
Putative uncharacterized protein CUL3-2 EMBL EFJ05563.1

Gene names

Name:	CUL3-1 EMBL EFJ26179.1
Synonyms:	CUL3-2 EMBL EFJ05563.1
ORF Names:	SELMODRAFT_136955 EMBL EFJ05563.1, SELMODRAFT_98006 EMBL EFJ26179.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome]

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	735 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the cullin family. RuleBase RU003829

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	embryo development ending in seed dormancy Inferred from electronic annotation. Source: EnsemblPlants/Gramene endosperm development Inferred from electronic annotation. Source: EnsemblPlants/Gramene positive regulation of flower development Inferred from electronic annotation. Source: EnsemblPlants/Gramene response to red or far red light Inferred from electronic annotation. Source: EnsemblPlants/Gramene ubiquitin-dependent protein catabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	cullin-RING ubiquitin ligase complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8RP07 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: DA3B9CC8B7EA7E74	FASTA	735	85,736
	10 20 30 40 50 60 MSQPKKKPFK IEPFKHKVEM DPRYAEKTWK ILEDAIHEIY NRNASGLSFE ELYRNAYNMV 70 80 90 100 110 120 LHKYGEKLYA GLETTMTQHL QEFSRVIEAA QGGLFLEELN GKWSEHNKAL QMIRDILMYM 130 140 150 160 170 180 DRTYVQNSSK TPVHELGLNL WRDTIVRCPT IKDRLRDTLL DLVHRERTGE VINRGLMRNI 190 200 210 220 230 240 TKMLMDLGVA VYEEEFEKPF LDAAADFYRI ESQQFLESSD CADYLKKAER RLNEEMDRVT 250 260 270 280 290 300 HYLFPRSEPK ITSVVDREMI GHHMKLLVEM ENSGLVSMLT DDKYDDLARM YSLFRRVTTG 310 320 330 340 350 360 LQTIRDLMTS HLREVGKNLV VDPERLKDPV EFVQRLLDEK DKYDRIIRSS FSNDKTFQNA 370 380 390 400 410 420 LNSAFEYFIN LNARSPEFIS LFVDDKLRKG LKGVSEEDIE TVLDKVMMLF RYLQEKDVFE 430 440 450 460 470 480 KYYKQHLAKR LLSGRTISDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SRDTMQGFSS 490 500 510 520 530 540 MMANCEQPGE APTLSVQVLT TGSWPTQSGA RCNLPTEILS VCDKFKTYYL STHTGRRLTW 550 560 570 580 590 600 QTNMGTADLK ATFGNGARHE LNVSTYQMCV LMLFNMADKV TYREIEQATD IPAADLKRCL 610 620 630 640 650 660 QSLALVKGKN VLRKEPMSKD INEDDVFLFN DKFASKLYKV KISTVVAQKE SEPEKQETRQ 670 680 690 700 710 720 KVEEDRKPQI EAAIVRIMKS RRVLDHNNIV SEVTKQLQAR FLPNPAVIKK RIESLIEREF 730 LERDKVDRKL YRYLA

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377719 Genomic DNA. Translation: EFJ05563.1. GL377585 Genomic DNA. Translation: EFJ26179.1.
RefSeq	XP_002972958.1. XM_002972912.1. XP_002993378.1. XM_002993332.1.
UniGene	Smo.12491.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ05563; EFJ05563; SELMODRAFT_136955. EFJ26179; EFJ26179; SELMODRAFT_98006.
GeneID	9637298. 9640937.
KEGG	smo:SELMODRAFT_136955. smo:SELMODRAFT_98006.
Phylogenomic databases
KO	K03869.
Family and domain databases
Gene3D	1.10.10.10. 2 hits.
InterPro	IPR016158. Cullin_homology. IPR001373. Cullin_N. IPR019559. Cullin_neddylation_domain. IPR016159. Cullin_repeat-like_dom. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00888. Cullin. 1 hit. PF10557. Cullin_Nedd8. 1 hit. [Graphical view]
SMART	SM00182. CULLIN. 1 hit. SM00884. Cullin_Nedd8. 1 hit. [Graphical view]
SUPFAM	SSF75632. Cullin_homology. 1 hit. SSF74788. Cullin_repeat-like. 1 hit.
PROSITE	PS50069. CULLIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8RP07_SELML

Accession

Primary (citable) accession number: D8RP07

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)