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Protein
Submitted name:

Putative uncharacterized protein CUL3-1

Gene

CUL3-1

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein CUL3-1Imported
Submitted name:
Putative uncharacterized protein CUL3-2Imported
Gene namesi
Name:CUL3-1Imported
Synonyms:CUL3-2Imported
ORF Names:SELMODRAFT_136955Imported, SELMODRAFT_98006Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. cullin-RING ubiquitin ligase complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the cullin family.UniRule annotation

Phylogenomic databases

InParanoidiD8RP07.
KOiK03869.
OMAiHMRPIVE.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS50069. CULLIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8RP07-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQPKKKPFK IEPFKHKVEM DPRYAEKTWK ILEDAIHEIY NRNASGLSFE
60 70 80 90 100
ELYRNAYNMV LHKYGEKLYA GLETTMTQHL QEFSRVIEAA QGGLFLEELN
110 120 130 140 150
GKWSEHNKAL QMIRDILMYM DRTYVQNSSK TPVHELGLNL WRDTIVRCPT
160 170 180 190 200
IKDRLRDTLL DLVHRERTGE VINRGLMRNI TKMLMDLGVA VYEEEFEKPF
210 220 230 240 250
LDAAADFYRI ESQQFLESSD CADYLKKAER RLNEEMDRVT HYLFPRSEPK
260 270 280 290 300
ITSVVDREMI GHHMKLLVEM ENSGLVSMLT DDKYDDLARM YSLFRRVTTG
310 320 330 340 350
LQTIRDLMTS HLREVGKNLV VDPERLKDPV EFVQRLLDEK DKYDRIIRSS
360 370 380 390 400
FSNDKTFQNA LNSAFEYFIN LNARSPEFIS LFVDDKLRKG LKGVSEEDIE
410 420 430 440 450
TVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGRTISDD AERSLIVKLK
460 470 480 490 500
TECGYQFTSK LEGMFTDMKT SRDTMQGFSS MMANCEQPGE APTLSVQVLT
510 520 530 540 550
TGSWPTQSGA RCNLPTEILS VCDKFKTYYL STHTGRRLTW QTNMGTADLK
560 570 580 590 600
ATFGNGARHE LNVSTYQMCV LMLFNMADKV TYREIEQATD IPAADLKRCL
610 620 630 640 650
QSLALVKGKN VLRKEPMSKD INEDDVFLFN DKFASKLYKV KISTVVAQKE
660 670 680 690 700
SEPEKQETRQ KVEEDRKPQI EAAIVRIMKS RRVLDHNNIV SEVTKQLQAR
710 720 730
FLPNPAVIKK RIESLIEREF LERDKVDRKL YRYLA
Length:735
Mass (Da):85,736
Last modified:October 5, 2010 - v1
Checksum:iDA3B9CC8B7EA7E74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377719 Genomic DNA. Translation: EFJ05563.1.
GL377585 Genomic DNA. Translation: EFJ26179.1.
RefSeqiXP_002972958.1. XM_002972912.1.
XP_002993378.1. XM_002993332.1.
UniGeneiSmo.12491.

Genome annotation databases

EnsemblPlantsiEFJ05563; EFJ05563; SELMODRAFT_136955.
EFJ26179; EFJ26179; SELMODRAFT_98006.
GeneIDi9637298.
9640937.
KEGGismo:SELMODRAFT_136955.
smo:SELMODRAFT_98006.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377719 Genomic DNA. Translation: EFJ05563.1.
GL377585 Genomic DNA. Translation: EFJ26179.1.
RefSeqiXP_002972958.1. XM_002972912.1.
XP_002993378.1. XM_002993332.1.
UniGeneiSmo.12491.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEFJ05563; EFJ05563; SELMODRAFT_136955.
EFJ26179; EFJ26179; SELMODRAFT_98006.
GeneIDi9637298.
9640937.
KEGGismo:SELMODRAFT_136955.
smo:SELMODRAFT_98006.

Phylogenomic databases

InParanoidiD8RP07.
KOiK03869.
OMAiHMRPIVE.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS50069. CULLIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8RP07_SELML
AccessioniPrimary (citable) accession number: D8RP07
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.