Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

D8RP07

- D8RP07_SELML

UniProt

D8RP07 - D8RP07_SELML

Protein
Submitted name:

Putative uncharacterized protein CUL3-1

Gene

CUL3-1

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Biological processi

    1. embryo development ending in seed dormancy Source: EnsemblPlants/Gramene
    2. endosperm development Source: EnsemblPlants/Gramene
    3. positive regulation of flower development Source: EnsemblPlants/Gramene
    4. response to red or far red light Source: EnsemblPlants/Gramene
    5. ubiquitin-dependent protein catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein CUL3-1Imported
    Submitted name:
    Putative uncharacterized protein CUL3-2Imported
    Gene namesi
    Name:CUL3-1Imported
    Synonyms:CUL3-2Imported
    ORF Names:SELMODRAFT_136955Imported, SELMODRAFT_98006Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. cullin-RING ubiquitin ligase complex Source: InterPro
    2. cytosol Source: EnsemblPlants/Gramene

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the cullin family.UniRule annotation

    Phylogenomic databases

    KOiK03869.

    Family and domain databases

    Gene3Di1.10.10.10. 2 hits.
    InterProiIPR016158. Cullin_homology.
    IPR001373. Cullin_N.
    IPR019559. Cullin_neddylation_domain.
    IPR016159. Cullin_repeat-like_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00888. Cullin. 1 hit.
    PF10557. Cullin_Nedd8. 1 hit.
    [Graphical view]
    SMARTiSM00182. CULLIN. 1 hit.
    SM00884. Cullin_Nedd8. 1 hit.
    [Graphical view]
    SUPFAMiSSF74788. SSF74788. 1 hit.
    SSF75632. SSF75632. 1 hit.
    PROSITEiPS50069. CULLIN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8RP07-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQPKKKPFK IEPFKHKVEM DPRYAEKTWK ILEDAIHEIY NRNASGLSFE    50
    ELYRNAYNMV LHKYGEKLYA GLETTMTQHL QEFSRVIEAA QGGLFLEELN 100
    GKWSEHNKAL QMIRDILMYM DRTYVQNSSK TPVHELGLNL WRDTIVRCPT 150
    IKDRLRDTLL DLVHRERTGE VINRGLMRNI TKMLMDLGVA VYEEEFEKPF 200
    LDAAADFYRI ESQQFLESSD CADYLKKAER RLNEEMDRVT HYLFPRSEPK 250
    ITSVVDREMI GHHMKLLVEM ENSGLVSMLT DDKYDDLARM YSLFRRVTTG 300
    LQTIRDLMTS HLREVGKNLV VDPERLKDPV EFVQRLLDEK DKYDRIIRSS 350
    FSNDKTFQNA LNSAFEYFIN LNARSPEFIS LFVDDKLRKG LKGVSEEDIE 400
    TVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGRTISDD AERSLIVKLK 450
    TECGYQFTSK LEGMFTDMKT SRDTMQGFSS MMANCEQPGE APTLSVQVLT 500
    TGSWPTQSGA RCNLPTEILS VCDKFKTYYL STHTGRRLTW QTNMGTADLK 550
    ATFGNGARHE LNVSTYQMCV LMLFNMADKV TYREIEQATD IPAADLKRCL 600
    QSLALVKGKN VLRKEPMSKD INEDDVFLFN DKFASKLYKV KISTVVAQKE 650
    SEPEKQETRQ KVEEDRKPQI EAAIVRIMKS RRVLDHNNIV SEVTKQLQAR 700
    FLPNPAVIKK RIESLIEREF LERDKVDRKL YRYLA 735
    Length:735
    Mass (Da):85,736
    Last modified:October 5, 2010 - v1
    Checksum:iDA3B9CC8B7EA7E74
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377719 Genomic DNA. Translation: EFJ05563.1.
    GL377585 Genomic DNA. Translation: EFJ26179.1.
    RefSeqiXP_002972958.1. XM_002972912.1.
    XP_002993378.1. XM_002993332.1.
    UniGeneiSmo.12491.

    Genome annotation databases

    EnsemblPlantsiEFJ05563; EFJ05563; SELMODRAFT_136955.
    EFJ26179; EFJ26179; SELMODRAFT_98006.
    GeneIDi9637298.
    9640937.
    KEGGismo:SELMODRAFT_136955.
    smo:SELMODRAFT_98006.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377719 Genomic DNA. Translation: EFJ05563.1 .
    GL377585 Genomic DNA. Translation: EFJ26179.1 .
    RefSeqi XP_002972958.1. XM_002972912.1.
    XP_002993378.1. XM_002993332.1.
    UniGenei Smo.12491.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ05563 ; EFJ05563 ; SELMODRAFT_136955 .
    EFJ26179 ; EFJ26179 ; SELMODRAFT_98006 .
    GeneIDi 9637298.
    9640937.
    KEGGi smo:SELMODRAFT_136955.
    smo:SELMODRAFT_98006.

    Phylogenomic databases

    KOi K03869.

    Family and domain databases

    Gene3Di 1.10.10.10. 2 hits.
    InterProi IPR016158. Cullin_homology.
    IPR001373. Cullin_N.
    IPR019559. Cullin_neddylation_domain.
    IPR016159. Cullin_repeat-like_dom.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00888. Cullin. 1 hit.
    PF10557. Cullin_Nedd8. 1 hit.
    [Graphical view ]
    SMARTi SM00182. CULLIN. 1 hit.
    SM00884. Cullin_Nedd8. 1 hit.
    [Graphical view ]
    SUPFAMi SSF74788. SSF74788. 1 hit.
    SSF75632. SSF75632. 1 hit.
    PROSITEi PS50069. CULLIN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8RP07_SELML
    AccessioniPrimary (citable) accession number: D8RP07
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3