Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D8RMH8 (D8RMH8_SELML) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:SELMODRAFT_97625 EMBL EFJ26340.1
OrganismSelaginella moellendorffii (Spikemoss) [Complete proteome]
Taxonomic identifier88036 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: InterPro

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8RMH8 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 34F391378D0F6F4E

FASTA40746,076
        10         20         30         40         50         60 
MIFCVAFQGF NWESWRNPCW YDVLMNTAED LAQAGVTDIW LPPATHSVAP QGYMPGRLYD 

        70         80         90        100        110        120 
LNASKYGNEE KLKQVIDKFH SHGIRCIADI VINHRCGDSQ DQRGVWCIFE GGTPDERLDW 

       130        140        150        160        170        180 
GPWAITKDDY AYSDGSGAPD TGEDFGAAPD IDHTNPRVQD DLAGWMKWMK ETIGFDGWRF 

       190        200        210        220        230        240 
DFSKGYAGSY TGLYIERTTP EFSVGEFWTN LNYGPDGSVE YNQDSHRQEV VDWINATGNR 

       250        260        270        280        290        300 
STAFDFTTKG ILQEAVKNQF WRLRDPNNKP AGVIGYWPQK AVTFVDNHDT GSTQKHWPFP 

       310        320        330        340        350        360 
ADKVMLGYVY ILTHPGIPCI FYDHYYEWGL KDEIKALLEV RKRNNVVANS SVSIIAAEED 

       370        380        390        400 
VYVASVADGK LVVKMGPRFD IGDMAPSSDE FAIAALGNEY CVWERKN 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL377584 Genomic DNA. Translation: EFJ26340.1.
RefSeqXP_002972254.1. XM_002972208.1.
UniGeneSmo.1757.

3D structure databases

ProteinModelPortalD8RMH8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsEFJ26340; EFJ26340; SELMODRAFT_97625.
GeneID9650591.
KEGGsmo:SELMODRAFT_97625.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8RMH8_SELML
AccessionPrimary (citable) accession number: D8RMH8
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 13, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)