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Protein
Submitted name:

Uncharacterized protein

Gene

SELMODRAFT_440984

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_440984Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiopsidaSelaginellalesSelaginellaceaeSelaginella
Proteomesi
  • UP000001514 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei361 – 384HelicalSequence analysisAdd BLAST24
Transmembranei404 – 433HelicalSequence analysisAdd BLAST30

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi88036.EFJ29183

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 138RRMInterPro annotationAdd BLAST80
Domaini206 – 237RanBP2-typeInterPro annotationAdd BLAST32

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410J053 Eukaryota
ENOG410YUQ1 LUCA
InParanoidiD8RFU4
OrthoDBiEOG09360KOC

Family and domain databases

Gene3Di3.30.70.3301 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034870 TET_fam
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf
PANTHERiPTHR23238 PTHR23238, 1 hit
PfamiView protein in Pfam
PF00641 zf-RanBP, 1 hit
SMARTiView protein in SMART
SM00547 ZnF_RBZ, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
SSF90209 SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit

Sequencei

Sequence statusi: Complete.

D8RFU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAEPEGLA AEVAAAVPQE EGEWDREKGS QQPESTPLNS ALRSEVERRE
60 70 80 90 100
VHRFREDADM IHISNLPDGV MEENLVELLA EAGEPKVGRE GIKVFKTYRG
110 120 130 140 150
DCEAEVVLED PKAAKGLIKW FDGYEYKGSK IQVSLARKKS GSRSRSPSLS
160 170 180 190 200
PRRGRFSDFP FRAAFRGRGR RYDGPGRGGG FGRGRGPSDD FRADGFGRNN
210 220 230 240 250
PNVAPREGDW ICTEPTCGNL NFARRTACNN CSRPRRDMSP FRMDPPNFRP
260 270 280 290 300
LPPPFLDGPP PEASIEEEVF MVVDTGRGKE TTITRTGGRP QEALETRDDR
310 320 330 340 350
HRLMLLAGEE EDETIEREAG LQFQFAGTAT SRSGHIWITA MVAVEGTAAE
360 370 380 390 400
RDETRETRFE VVLVAATLVD AAGLIELALV VAALDLDGAG AVDGLLDLSG
410 420 430 440
GSNFPGVGVG GLLAAFFSPL AAVAVVAAVV PCFDAALARG PIRSFSG
Length:447
Mass (Da):48,333
Last modified:October 5, 2010 - v1
Checksum:i73945F6EAF288330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377578 Genomic DNA Translation: EFJ29183.1
RefSeqiXP_002970059.1, XM_002970013.1
UniGeneiSmo.4613

Genome annotation databases

EnsemblPlantsiEFJ29183; EFJ29183; SELMODRAFT_440984
GeneIDi9646100
GrameneiEFJ29183; EFJ29183; SELMODRAFT_440984
KEGGismo:SELMODRAFT_440984

Similar proteinsi

Entry informationi

Entry nameiD8RFU4_SELML
AccessioniPrimary (citable) accession number: D8RFU4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: February 28, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported