SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D8RBH6

- D8RBH6_SELML

UniProt

D8RBH6 - D8RBH6_SELML

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Putative uncharacterized protein
Gene
SELMODRAFT_145611, SELMODRAFT_267931
Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. biosynthetic process Source: InterPro
  2. response to hypoxia Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_145611Imported, SELMODRAFT_267931Imported
OrganismiSelaginella moellendorffii (Spikemoss)
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiophytaIsoetopsidaSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. chloroplast stroma Source: EnsemblPlants/Gramene
  3. membrane Source: EnsemblPlants/Gramene
  4. vacuole Source: EnsemblPlants/Gramene
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK14272.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

D8RBH6-1 [UniParc]FASTAAdd to Basket

« Hide

MASKVLDPDN INENVKKCVY AVRGELYLRA SELQKEGKKI IFTNVGNPHA    50
LGQKPLTFPR QVMALCQAPF LMDDPNVGLL FPPDAVARAK HYLSMTSGGV 100
GAYSDSRGLP GVRQEVAEFI QKRDGYPSDP EHIFLTDGAS KGVMMMLNAL 150
IRNEKDGVLV PIPQYPLYSA SIALYGGILI PYYLNEESNW SLDFSDVRNQ 200
VVIARNKKIV PRALVFINPG NPTGQCLSVT NLQDLIKFCY KERLLLMADE 250
VYQVNVYQDE RPFVSAKKVL MDMGAPYSNT VELVSFHSVS KGFLGECGQR 300
GGYFEMTNIH PQTVEELYKV ASISLSPNVV GQIMMGLMVT PPRPFDISYP 350
QYQAESKAII ESMRRRAHIM TDGFNKCEDV VCNFTEGAMY SFPRIKLSKA 400
AMDAAAQAGK AADVFYCLKL LEATGISTVP GSGFGQKEGT LHLRTTILPL 450
EQDMPGIMAK FQKFHADFMA QYSDYSVSSR L 481
Length:481
Mass (Da):53,378
Last modified:October 5, 2010 - v1
Checksum:i7FEAFA7E54123592
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377594 Genomic DNA. Translation: EFJ23041.1.
GL377575 Genomic DNA. Translation: EFJ30498.1.
RefSeqiXP_002968244.1. XM_002968198.1.
XP_002976136.1. XM_002976090.1.
UniGeneiSmo.978.

Genome annotation databases

EnsemblPlantsiEFJ23041; EFJ23041; SELMODRAFT_267931.
EFJ30498; EFJ30498; SELMODRAFT_145611.
GeneIDi9631419.
9645831.
KEGGismo:SELMODRAFT_145611.
smo:SELMODRAFT_267931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377594 Genomic DNA. Translation: EFJ23041.1 .
GL377575 Genomic DNA. Translation: EFJ30498.1 .
RefSeqi XP_002968244.1. XM_002968198.1.
XP_002976136.1. XM_002976090.1.
UniGenei Smo.978.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ23041 ; EFJ23041 ; SELMODRAFT_267931 .
EFJ30498 ; EFJ30498 ; SELMODRAFT_145611 .
GeneIDi 9631419.
9645831.
KEGGi smo:SELMODRAFT_145611.
smo:SELMODRAFT_267931.

Phylogenomic databases

KOi K14272.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8RBH6_SELML
AccessioniPrimary (citable) accession number: D8RBH6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi