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D8RAG3

- D8RAG3_SELML

UniProt

D8RAG3 - D8RAG3_SELML

Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_440247

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. dihydroorotate oxidase activity Source: InterPro

    GO - Biological processi

    1. 'de novo' pyrimidine nucleobase biosynthetic process Source: InterPro
    2. UMP biosynthetic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SELMODRAFT_440247Imported
    OrganismiSelaginella moellendorffii (Spikemoss)Imported
    Taxonomic identifieri88036 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
    ProteomesiUP000001514: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK00254.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    InterProiIPR013785. Aldolase_TIM.
    IPR012135. Dihydroorotate_DH_1_2.
    IPR005719. Dihydroorotate_DH_2.
    IPR001295. Dihydroorotate_DH_CS.
    [Graphical view]
    PfamiPF01180. DHO_dh. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01036. pyrD_sub2. 1 hit.
    PROSITEiPS00911. DHODEHASE_1. 1 hit.
    PS00912. DHODEHASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8RAG3-1 [UniParc]FASTAAdd to Basket

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    MREGRLLAAI ARRFAYGSSS CIHTAAETSG SAKEAVAAAF QKPPLPPKIR    50
    LTWGRVLTGT LLGAVIAGGA YVGTRDEATI SAWTFEAAKY INPLFRLLDP 100
    ENAHKVAIWA SSHCLCPRET RPDPPVLEVS VWGRTFSNPV GLAAGFDKNA 150
    EAVEGLLGIG FGFMEVGSVT PVPQEGNPKP RVFRLPEQGA IINRYGFNSE 200
    GIVAVAKRLG AQHGKRRMAE TVNSAITTNT EQRVLGGKAG PGILGVNLGK 250
    NKTSEDAAAD YVQGVHTLSQ YADYLVINVS SPNTPGLRKL QGRKQLKDLI 300
    KKVLAARDEM QWGEEGPPPL LVKIAPDLSK QDLADIAAVA LSLRLDGLII 350
    ANTTVSRPDS VIGLVHADEM GGLSGKPLFT LSTEVLREMY QLTWGKIPLV 400
    GCGGISSGEE AYVKIRAGAT LVQLYTTFAY EGPALIPRIK AELAACLERD 450
    GFKSAQEAIG ADHR 464
    Length:464
    Mass (Da):49,511
    Last modified:October 5, 2010 - v1
    Checksum:iE1574FF94CF98AF5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377575 Genomic DNA. Translation: EFJ30613.1.
    RefSeqiXP_002968359.1. XM_002968313.1.
    UniGeneiSmo.7808.

    Genome annotation databases

    EnsemblPlantsiEFJ30613; EFJ30613; SELMODRAFT_440247.
    GeneIDi9631151.
    KEGGismo:SELMODRAFT_440247.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377575 Genomic DNA. Translation: EFJ30613.1 .
    RefSeqi XP_002968359.1. XM_002968313.1.
    UniGenei Smo.7808.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EFJ30613 ; EFJ30613 ; SELMODRAFT_440247 .
    GeneIDi 9631151.
    KEGGi smo:SELMODRAFT_440247.

    Phylogenomic databases

    KOi K00254.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    InterProi IPR013785. Aldolase_TIM.
    IPR012135. Dihydroorotate_DH_1_2.
    IPR005719. Dihydroorotate_DH_2.
    IPR001295. Dihydroorotate_DH_CS.
    [Graphical view ]
    Pfami PF01180. DHO_dh. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01036. pyrD_sub2. 1 hit.
    PROSITEi PS00911. DHODEHASE_1. 1 hit.
    PS00912. DHODEHASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
      Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
      , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
      Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8RAG3_SELML
    AccessioniPrimary (citable) accession number: D8RAG3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3