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D8QTG6

- D8QTG6_SELML

UniProt

D8QTG6 - D8QTG6_SELML

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Protein

Glutamate decarboxylase

Gene

SELMODRAFT_164618

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:SELMODRAFT_164618Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD8QTG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiD8QTG6.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D8QTG6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVLTMTSEAD TSLQSTFASR YSQSSVSRYR IPDQETPKDA AYQIISDELM
60 70 80 90 100
LDGNPRLNLA SFVTTWMEPE CDKLVMASLN KNYIDMDEYP VTTELQDRCV
110 120 130 140 150
NMIARLFNAP VGDSEQAIGA GTIGSSEAIM LAGLALKRKW QNKRKAEGKP
160 170 180 190 200
WDKPNIVTGS NVQVCWEKFA RYFEVELKEV KLSKDYYVMD PHKAVEMVDE
210 220 230 240 250
NTICIAAILG STYNGEFEDV KLLNELLEKK NKDTGWNTPI HVDAASGGFI
260 270 280 290 300
APFLYPDLEW DFRLPLVKSI NVSGHKYGLV YAGIGWVIWR GKEDLPEELV
310 320 330 340 350
FHINYLGADQ PTFTLNFSKG ASQIIAQYYQ LIRLGFRGYK SIMQNCQANA
360 370 380 390 400
KILADALVAT GRFVILSKEI GVPVVAFSLK DRKNHDEYEI ADHLRRYGWI
410 420 430 440 450
VPAYTMAPDA QDVTLLRVVV REDFSRTLAD RLVSDIVAVF KYLDAHPPRL
460 470 480 490 500
IQAVTEALAK DPEVKKELLD AEPGEVKAQL DLRKSSVFED IRNSQRAFKV
510
WKKFALSKTN GVC
Length:513
Mass (Da):57,913
Last modified:October 5, 2010 - v1
Checksum:i6A84EB0CBAC9DCD4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377566 Genomic DNA. Translation: EFJ36644.1.
RefSeqiXP_002961384.1. XM_002961338.1.
UniGeneiSmo.14626.

Genome annotation databases

EnsemblPlantsiEFJ36644; EFJ36644; SELMODRAFT_164618.
GeneIDi9656547.
KEGGismo:SELMODRAFT_164618.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377566 Genomic DNA. Translation: EFJ36644.1 .
RefSeqi XP_002961384.1. XM_002961338.1.
UniGenei Smo.14626.

3D structure databases

ProteinModelPortali D8QTG6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EFJ36644 ; EFJ36644 ; SELMODRAFT_164618 .
GeneIDi 9656547.
KEGGi smo:SELMODRAFT_164618.

Phylogenomic databases

InParanoidi D8QTG6.
KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8QTG6_SELML
AccessioniPrimary (citable) accession number: D8QTG6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 26, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3