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Protein

Glutamate decarboxylase

Gene

SCHCODRAFT_59494

Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:SCHCODRAFT_59494Imported
OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)Imported
Taxonomic identifieri578458 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
ProteomesiUP000007431: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiD8QE54.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D8QE54-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLSRHVDPT AVLAAARDHP HRRHVNRHEK SVLGQSWTRD EDATAAPKYT
60 70 80 90 100
FPTHGIPSKS AYQLIHDEAA LDGNPALNLA SFVHTWMPDD GIRLFQEAAN
110 120 130 140 150
KNLADQDEYP AAQIIHNRCV SMLAHLWKAP TAETSAVGTS TAGSSEAIML
160 170 180 190 200
GGLALKKRWQ EQRKKAGKDY FHPNIVFGSN AQVALEKFAR RVAYWDVEAR
210 220 230 240 250
LVPVNSSTSY VMKPEDAIQF IDENTIGVMV ILGSTYNGAF EDVARMSDLL
260 270 280 290 300
DDLQERTGLD IPIHVDAASG GFIAPFAYPQ HKWAFDVSRV VSINSSGHKF
310 320 330 340 350
GLVYAGLGWL IFRDESCLHK DLIFELHYLG STEYSYTLNF SKPASPVFAQ
360 370 380 390 400
MFNFLNLGYN GYAKIAYKDL RNARILARAL ENTYFTILSD IHRKAPDAPA
410 420 430 440 450
DVDEEDPNYY VKGLPVVSFR FNDEYRQKYP HVKQAWMQTS LRTKGWIVPN
460 470 480 490 500
YNAPKGEEKT EMLRVVMRES ITEDLVERLV VDILECAEAF MAPEGSDMMI
510 520 530 540
ASAGGTMHQP DIEHSRPQPH NFSTSSDTEG LEQSGYSRQC
Length:540
Mass (Da):60,555
Last modified:October 5, 2010 - v1
Checksum:i39EB24021E3CBBD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377310 Genomic DNA. Translation: EFI94105.1.
RefSeqiXP_003029008.1. XM_003028962.1.

Genome annotation databases

GeneIDi9591111.
KEGGiscm:SCHCODRAFT_59494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377310 Genomic DNA. Translation: EFI94105.1.
RefSeqiXP_003029008.1. XM_003028962.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9591111.
KEGGiscm:SCHCODRAFT_59494.

Phylogenomic databases

InParanoidiD8QE54.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H4-8 / FGSC 9210Imported.

Entry informationi

Entry nameiD8QE54_SCHCM
AccessioniPrimary (citable) accession number: D8QE54
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: February 4, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.