D8QE54 (D8QE54_SCHCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFI94105.1

Gene names

ORF Names:

SCHCODRAFT_59494 EMBL EFI94105.1

Organism

Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus) [Complete proteome]

Taxonomic identifier

578458 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Agaricomycetes › Agaricomycetidae › Agaricales › Schizophyllaceae › Schizophyllum › Schizophyllum commune

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8QE54 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 39EB24021E3CBBD6	FASTA	540	60,555
	10 20 30 40 50 60 MSLSRHVDPT AVLAAARDHP HRRHVNRHEK SVLGQSWTRD EDATAAPKYT FPTHGIPSKS 70 80 90 100 110 120 AYQLIHDEAA LDGNPALNLA SFVHTWMPDD GIRLFQEAAN KNLADQDEYP AAQIIHNRCV 130 140 150 160 170 180 SMLAHLWKAP TAETSAVGTS TAGSSEAIML GGLALKKRWQ EQRKKAGKDY FHPNIVFGSN 190 200 210 220 230 240 AQVALEKFAR RVAYWDVEAR LVPVNSSTSY VMKPEDAIQF IDENTIGVMV ILGSTYNGAF 250 260 270 280 290 300 EDVARMSDLL DDLQERTGLD IPIHVDAASG GFIAPFAYPQ HKWAFDVSRV VSINSSGHKF 310 320 330 340 350 360 GLVYAGLGWL IFRDESCLHK DLIFELHYLG STEYSYTLNF SKPASPVFAQ MFNFLNLGYN 370 380 390 400 410 420 GYAKIAYKDL RNARILARAL ENTYFTILSD IHRKAPDAPA DVDEEDPNYY VKGLPVVSFR 430 440 450 460 470 480 FNDEYRQKYP HVKQAWMQTS LRTKGWIVPN YNAPKGEEKT EMLRVVMRES ITEDLVERLV 490 500 510 520 530 540 VDILECAEAF MAPEGSDMMI ASAGGTMHQP DIEHSRPQPH NFSTSSDTEG LEQSGYSRQC

References

[1]

"Genome sequence of the model mushroom Schizophyllum commune." Ohm R.A., de Jong J.F., Lugones L.G., Aerts A., Kothe E., Stajich J.E., de Vries R.P., Record E., Levasseur A., Baker S.E., Bartholomew K.A., Coutinho P.M., Erdmann S., Fowler T.J., Gathman A.C., Lombard V., Henrissat B., Knabe N. , Kuees U., Lilly W.W., Lindquist E., Lucas S., Magnuson J.K., Piumi F., Raudaskoski M., Salamov A., Schmutz J., Schwarze F.W.M.R., vanKuyk P.A., Horton J.S., Grigoriev I.V., Woesten H.A.B. Nat. Biotechnol. 28:957-963(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: H4-8 / FGSC 9210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377310 Genomic DNA. Translation: EFI94105.1.
RefSeq	XP_003029008.1. XM_003028962.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9591111.
KEGG	scm:SCHCODRAFT_59494.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8QE54_SCHCM

Accession

Primary (citable) accession number: D8QE54

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	March 6, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)