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D8Q8Z7 (D8Q8Z7_SCHCM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length823 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
D8Q8Z7 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: E677B76D3940347E

FASTA82390,593
        10         20         30         40         50         60 
MPAKRSRDAP ESPNKRQKGK QARIDTFFSS PRTPAHAPSP PTATHEVIEI DSSDDAKEPK 

        70         80         90        100        110        120 
AGPSKAPSHA SPPTPFVRTF SLKNNHAPPS YPSLTTDSLS FDVAQVSAQW TAGSPVPYSF 

       130        140        150        160        170        180 
LAHTLKSVSE TKSRIAITDA LTNCLRVVVQ HHPASLLPAV YLLSNTVAPS YESVELGLGT 

       190        200        210        220        230        240 
SISKSIQQIS GLSSAALRDL YNQLGDVGDV AFAAKSKVRT LIPHPPLLVP GVYKSLLSIA 

       250        260        270        280        290        300 
HCKGQGAVKE KQKIVEKLLI ASKGEETRFL ARTLTQNLRV GAVRTTLLIA LSRAFVLTPR 

       310        320        330        340        350        360 
PDGRPSGLHA SEKLLDSVRA LGSPPKSPQK KKRADSDDDA RERMKALFSQ AESLVKQVYV 

       370        380        390        400        410        420 
RHPCYEDIIE ALVTEGLDGL DQHVSLAVGI PLMPTLGSPM RSLDEVYDIL QDHPFAAELK 

       430        440        450        460        470        480 
YDGQRAQIHG RRDDEGNTSV RIFSRHLEDM TTKYPDVVHM IQIMCGRTTG PTSFIIDSEI 

       490        500        510        520        530        540 
VALDPETGAL KTFQELSNRA RKDVQLADVR VAVGVFAFDL MFLDGQELIG LPFRERRDKL 

       550        560        570        580        590        600 
YSRFPAFVPE EKAIARFSHV DCCDSQLGRD AIEGFMVKAT ESRCEGLMIK LLDSCELEER 

       610        620        630        640        650        660 
DAKKAKTRRK PFPATYEPDK RTAAWLKLKK DYITGLGDSF DLVPVGAWHG NGRKAKWWSP 

       670        680        690        700        710        720 
ILLALKSEDG ELVAVCKCMS GFTDVFYKAL NDRYPLTEQS ETCSKQPLWG GDFGGFRPEV 

       730        740        750        760        770        780 
YFKPHEVWEV RAADITVSPV SVAAKGLVSD SRGLSLRFPR YIKTREDKGI EEATTASQVA 

       790        800        810        820 
RMYQQQQARG IDGGGNDEGD LLDVDVDEDI EEHSDSAGED DST 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL377308 Genomic DNA. Translation: EFI95150.1.
RefSeqXP_003030053.1. XM_003030007.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9588032.
KEGGscm:SCHCODRAFT_235879.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8Q8Z7_SCHCM
AccessionPrimary (citable) accession number: D8Q8Z7
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 13, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)