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D8Q7N0

- D8Q7N0_SCHCM

UniProt

D8Q7N0 - D8Q7N0_SCHCM

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Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene
SCHCODRAFT_235431
Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei222 – 2221Nucleophile By similarityUniRule annotation
Active sitei246 – 2461Proton donor By similarityUniRule annotation
Sitei313 – 3131Transition state stabilizer By similarityUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 13 proteinImported
Gene namesi
ORF Names:SCHCODRAFT_235431Imported
OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Taxonomic identifieri578458 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
ProteomesiUP000007431: Unassembled WGS sequence

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi48 ↔ 56 By similarityUniRule annotation
Disulfide bondi256 ↔ 299 By similarityUniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD8Q7N0.

Family & Domainsi

Phylogenomic databases

KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PIRSFiPIRSF001024. Alph-amyl_fung. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D8Q7N0-1 [UniParc]FASTAAdd to Basket

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MFSKSLLLSL PLISGAFAAT AEDWRKRSIY ELVTDRFART DGSTTAPCNT    50
GDRVFCGGTW QGLTNHLDYI KNMGFTAVWI SPITMQIYGN THSGEAYHGY 100
WPKDYYQLNP NFGTADDLRN LAKALHDRGM YLMVDLVVNH YASWGDEDIQ 150
WSQYVPFNDQ KYFHDKCWIN WNNQQSIEDC WMGDGYVPLP DLDTENDYVV 200
STLEKYVGEL VSNYSIDGLR LDATKNIRKD FWPGFCSAAG VYCQGEVWTA 250
DVNQFCPWQD YMAGLHNYPM HDYTVSAFSW HKGDVNALAN TLNALTNQCA 300
DVGLLGSFTE NHDNPRMGSV TNDLSQRKSL AAMTILSGNG IPIVYYGQEQ 350
IFDAKKDPDN REALWLSGYA TGGDKLYDYF AQLNGLRNWL VWNIPEGDYL 400
TAKPSYSVYD THTLVASKGV TKVLVSNMGA SVDGSVATSG WSAGEDVVDA 450
LSCNTYTADS QGKATISMKL SLPAAVLPKS SLGGSGICGL 490
Length:490
Mass (Da):54,358
Last modified:October 5, 2010 - v1
Checksum:iBA75C63A39F47A8F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377307 Genomic DNA. Translation: EFI96050.1.
RefSeqiXP_003030953.1. XM_003030907.1.

Genome annotation databases

GeneIDi9586700.
KEGGiscm:SCHCODRAFT_235431.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377307 Genomic DNA. Translation: EFI96050.1 .
RefSeqi XP_003030953.1. XM_003030907.1.

3D structure databases

ProteinModelPortali D8Q7N0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9586700.
KEGGi scm:SCHCODRAFT_235431.

Phylogenomic databases

KOi K01176.
OrthoDBi EOG7RBZJ4.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view ]
PIRSFi PIRSF001024. Alph-amyl_fung. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H4-8 / FGSC 9210.

Entry informationi

Entry nameiD8Q7N0_SCHCM
AccessioniPrimary (citable) accession number: D8Q7N0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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