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D8Q7N0

- D8Q7N0_SCHCM

UniProt

D8Q7N0 - D8Q7N0_SCHCM

Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene

SCHCODRAFT_235431

Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei222 – 2221Nucleophile
    Active sitei246 – 2461Proton donorUniRule annotation
    Sitei313 – 3131Transition state stabilizerUniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate catabolic process Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 13 proteinImported
    Gene namesi
    ORF Names:SCHCODRAFT_235431Imported
    OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)Imported
    Taxonomic identifieri578458 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
    ProteomesiUP000007431: Unassembled WGS sequence

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi48 ↔ 56UniRule annotation
    Disulfide bondi256 ↔ 299UniRule annotation

    Keywords - PTMi

    Disulfide bondUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD8Q7N0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OrthoDBiEOG7RBZJ4.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013777. A-amylase_fun.
    IPR015340. A_amylase_DUF1966_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09260. DUF1966. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001024. Alph-amyl_fung. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8Q7N0-1 [UniParc]FASTAAdd to Basket

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    MFSKSLLLSL PLISGAFAAT AEDWRKRSIY ELVTDRFART DGSTTAPCNT    50
    GDRVFCGGTW QGLTNHLDYI KNMGFTAVWI SPITMQIYGN THSGEAYHGY 100
    WPKDYYQLNP NFGTADDLRN LAKALHDRGM YLMVDLVVNH YASWGDEDIQ 150
    WSQYVPFNDQ KYFHDKCWIN WNNQQSIEDC WMGDGYVPLP DLDTENDYVV 200
    STLEKYVGEL VSNYSIDGLR LDATKNIRKD FWPGFCSAAG VYCQGEVWTA 250
    DVNQFCPWQD YMAGLHNYPM HDYTVSAFSW HKGDVNALAN TLNALTNQCA 300
    DVGLLGSFTE NHDNPRMGSV TNDLSQRKSL AAMTILSGNG IPIVYYGQEQ 350
    IFDAKKDPDN REALWLSGYA TGGDKLYDYF AQLNGLRNWL VWNIPEGDYL 400
    TAKPSYSVYD THTLVASKGV TKVLVSNMGA SVDGSVATSG WSAGEDVVDA 450
    LSCNTYTADS QGKATISMKL SLPAAVLPKS SLGGSGICGL 490
    Length:490
    Mass (Da):54,358
    Last modified:October 5, 2010 - v1
    Checksum:iBA75C63A39F47A8F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377307 Genomic DNA. Translation: EFI96050.1.
    RefSeqiXP_003030953.1. XM_003030907.1.

    Genome annotation databases

    GeneIDi9586700.
    KEGGiscm:SCHCODRAFT_235431.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377307 Genomic DNA. Translation: EFI96050.1 .
    RefSeqi XP_003030953.1. XM_003030907.1.

    3D structure databases

    ProteinModelPortali D8Q7N0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 9586700.
    KEGGi scm:SCHCODRAFT_235431.

    Phylogenomic databases

    KOi K01176.
    OrthoDBi EOG7RBZJ4.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013777. A-amylase_fun.
    IPR015340. A_amylase_DUF1966_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09260. DUF1966. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001024. Alph-amyl_fung. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H4-8 / FGSC 9210Imported.

    Entry informationi

    Entry nameiD8Q7N0_SCHCM
    AccessioniPrimary (citable) accession number: D8Q7N0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3