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D8Q5Z0

- D8Q5Z0_SCHCM

UniProt

D8Q5Z0 - D8Q5Z0_SCHCM

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Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene

SCHCODRAFT_85278

Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei223 – 2231NucleophileUniRule annotation
Active sitei247 – 2471Proton donorUniRule annotation
Sitei315 – 3151Transition state stabilizerUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 13 proteinImported
Gene namesi
ORF Names:SCHCODRAFT_85278Imported
OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)Imported
Taxonomic identifieri578458 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
ProteomesiUP000007431: Unassembled WGS sequence

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi49 ↔ 57UniRule annotation
Disulfide bondi167 ↔ 181UniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD8Q5Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiD8Q5Z0.
KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PIRSFiPIRSF001024. Alph-amyl_fung. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D8Q5Z0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMPTMQSLLL PALLASSALA ASADDWRQRT IYQLITDRFA LEDDSGASCD
60 70 80 90 100
TADRKYCGGT WKAIQNHLDY ISGMGFNAIW ISPVVKNVEG DLGYGEAYHG
110 120 130 140 150
YWTQDLDSLN DRFGSEDDLK ALVSAAHDKD IYVMVDVVVN HFAGSGKNFD
160 170 180 190 200
YDNFSPVSGS SSFHPQCWIK DEGNQTEVEQ CWLGDETLAL YDINTEDNAI
210 220 230 240 250
ASKLNDFVKN IVSTYGFDGV RIDTVKHIRK DFWPDFASSA GVFTIGEVLS
260 270 280 290 300
DNVTYAADYT EVLDAILDYP TYFALVNAFT NTSGDLSALQ NTVTEAQDKY
310 320 330 340 350
KNGELMTGSF SENHDYARLA SKTSDKSLIQ NAIAFNYIHD GIPITYYGQE
360 370 380 390 400
QGYTGGDEPA NREALWLSGY PTDNAFYKGI VALNAARKSA MNAGTNFLTT
410 420 430 440 450
KLAFQSQSDI GAMAVSKPPL LGFFTNTGSS GSASWSVDGA YDANEELVDV
460 470 480 490 500
LSCNTVTADG SGKVTATSSG GMPQVLIPTK YLSSDAGVCQ DQAGGAMSMR
510
VSAMAGLAAL VAFVVTAL
Length:518
Mass (Da):55,905
Last modified:October 5, 2010 - v1
Checksum:i59511519DAD8DA43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377306 Genomic DNA. Translation: EFI97493.1.
RefSeqiXP_003032396.1. XM_003032350.1.

Genome annotation databases

GeneIDi9596482.
KEGGiscm:SCHCODRAFT_85278.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377306 Genomic DNA. Translation: EFI97493.1 .
RefSeqi XP_003032396.1. XM_003032350.1.

3D structure databases

ProteinModelPortali D8Q5Z0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9596482.
KEGGi scm:SCHCODRAFT_85278.

Phylogenomic databases

InParanoidi D8Q5Z0.
KOi K01176.
OrthoDBi EOG7RBZJ4.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view ]
PIRSFi PIRSF001024. Alph-amyl_fung. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H4-8 / FGSC 9210Imported.

Entry informationi

Entry nameiD8Q5Z0_SCHCM
AccessioniPrimary (citable) accession number: D8Q5Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 26, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3