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D8Q5Z0

- D8Q5Z0_SCHCM

UniProt

D8Q5Z0 - D8Q5Z0_SCHCM

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Protein
Submitted name: Glycoside hydrolase family 13 protein
Gene
SCHCODRAFT_85278
Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi140 – 1401Calcium 1 By similarityUniRule annotation
Metal bindingi179 – 1791Calcium 1; via carbonyl oxygen By similarityUniRule annotation
Metal bindingi192 – 1921Calcium 1 By similarityUniRule annotation
Active sitei223 – 2231Nucleophile By similarityUniRule annotation
Metal bindingi223 – 2231Calcium 2 By similarityUniRule annotation
Metal bindingi227 – 2271Calcium 1; via carbonyl oxygen By similarityUniRule annotation
Active sitei247 – 2471Proton donor By similarityUniRule annotation
Metal bindingi247 – 2471Calcium 2 By similarityUniRule annotation
Sitei315 – 3151Transition state stabilizer By similarityUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 13 proteinImported
Gene namesi
ORF Names:SCHCODRAFT_85278Imported
OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Taxonomic identifieri578458 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
ProteomesiUP000007431: Unassembled WGS sequence

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi49 ↔ 57 By similarityUniRule annotation
Disulfide bondi167 ↔ 181 By similarityUniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD8Q5Z0.

Family & Domainsi

Phylogenomic databases

KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PIRSFiPIRSF001024. Alph-amyl_fung. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D8Q5Z0-1 [UniParc]FASTAAdd to Basket

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MMPTMQSLLL PALLASSALA ASADDWRQRT IYQLITDRFA LEDDSGASCD    50
TADRKYCGGT WKAIQNHLDY ISGMGFNAIW ISPVVKNVEG DLGYGEAYHG 100
YWTQDLDSLN DRFGSEDDLK ALVSAAHDKD IYVMVDVVVN HFAGSGKNFD 150
YDNFSPVSGS SSFHPQCWIK DEGNQTEVEQ CWLGDETLAL YDINTEDNAI 200
ASKLNDFVKN IVSTYGFDGV RIDTVKHIRK DFWPDFASSA GVFTIGEVLS 250
DNVTYAADYT EVLDAILDYP TYFALVNAFT NTSGDLSALQ NTVTEAQDKY 300
KNGELMTGSF SENHDYARLA SKTSDKSLIQ NAIAFNYIHD GIPITYYGQE 350
QGYTGGDEPA NREALWLSGY PTDNAFYKGI VALNAARKSA MNAGTNFLTT 400
KLAFQSQSDI GAMAVSKPPL LGFFTNTGSS GSASWSVDGA YDANEELVDV 450
LSCNTVTADG SGKVTATSSG GMPQVLIPTK YLSSDAGVCQ DQAGGAMSMR 500
VSAMAGLAAL VAFVVTAL 518
Length:518
Mass (Da):55,905
Last modified:October 5, 2010 - v1
Checksum:i59511519DAD8DA43
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377306 Genomic DNA. Translation: EFI97493.1.
RefSeqiXP_003032396.1. XM_003032350.1.

Genome annotation databases

GeneIDi9596482.
KEGGiscm:SCHCODRAFT_85278.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377306 Genomic DNA. Translation: EFI97493.1 .
RefSeqi XP_003032396.1. XM_003032350.1.

3D structure databases

ProteinModelPortali D8Q5Z0.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9596482.
KEGGi scm:SCHCODRAFT_85278.

Phylogenomic databases

KOi K01176.
OrthoDBi EOG7RBZJ4.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view ]
PIRSFi PIRSF001024. Alph-amyl_fung. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H4-8 / FGSC 9210.

Entry informationi

Entry nameiD8Q5Z0_SCHCM
AccessioniPrimary (citable) accession number: D8Q5Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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