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D8Q5Z0

- D8Q5Z0_SCHCM

UniProt

D8Q5Z0 - D8Q5Z0_SCHCM

Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene

SCHCODRAFT_85278

Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi140 – 1401Calcium 1
    Metal bindingi179 – 1791Calcium 1; via carbonyl oxygen
    Metal bindingi192 – 1921Calcium 1
    Active sitei223 – 2231NucleophileUniRule annotation
    Metal bindingi223 – 2231Calcium 2
    Metal bindingi227 – 2271Calcium 1; via carbonyl oxygen
    Active sitei247 – 2471Proton donorUniRule annotation
    Metal bindingi247 – 2471Calcium 2
    Sitei315 – 3151Transition state stabilizerUniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate catabolic process Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 13 proteinImported
    Gene namesi
    ORF Names:SCHCODRAFT_85278Imported
    OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)Imported
    Taxonomic identifieri578458 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
    ProteomesiUP000007431: Unassembled WGS sequence

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi49 ↔ 57UniRule annotation
    Disulfide bondi167 ↔ 181UniRule annotation

    Keywords - PTMi

    Disulfide bondUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD8Q5Z0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OrthoDBiEOG7RBZJ4.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013777. A-amylase_fun.
    IPR015340. A_amylase_DUF1966_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09260. DUF1966. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001024. Alph-amyl_fung. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8Q5Z0-1 [UniParc]FASTAAdd to Basket

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    MMPTMQSLLL PALLASSALA ASADDWRQRT IYQLITDRFA LEDDSGASCD    50
    TADRKYCGGT WKAIQNHLDY ISGMGFNAIW ISPVVKNVEG DLGYGEAYHG 100
    YWTQDLDSLN DRFGSEDDLK ALVSAAHDKD IYVMVDVVVN HFAGSGKNFD 150
    YDNFSPVSGS SSFHPQCWIK DEGNQTEVEQ CWLGDETLAL YDINTEDNAI 200
    ASKLNDFVKN IVSTYGFDGV RIDTVKHIRK DFWPDFASSA GVFTIGEVLS 250
    DNVTYAADYT EVLDAILDYP TYFALVNAFT NTSGDLSALQ NTVTEAQDKY 300
    KNGELMTGSF SENHDYARLA SKTSDKSLIQ NAIAFNYIHD GIPITYYGQE 350
    QGYTGGDEPA NREALWLSGY PTDNAFYKGI VALNAARKSA MNAGTNFLTT 400
    KLAFQSQSDI GAMAVSKPPL LGFFTNTGSS GSASWSVDGA YDANEELVDV 450
    LSCNTVTADG SGKVTATSSG GMPQVLIPTK YLSSDAGVCQ DQAGGAMSMR 500
    VSAMAGLAAL VAFVVTAL 518
    Length:518
    Mass (Da):55,905
    Last modified:October 5, 2010 - v1
    Checksum:i59511519DAD8DA43
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377306 Genomic DNA. Translation: EFI97493.1.
    RefSeqiXP_003032396.1. XM_003032350.1.

    Genome annotation databases

    GeneIDi9596482.
    KEGGiscm:SCHCODRAFT_85278.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377306 Genomic DNA. Translation: EFI97493.1 .
    RefSeqi XP_003032396.1. XM_003032350.1.

    3D structure databases

    ProteinModelPortali D8Q5Z0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 9596482.
    KEGGi scm:SCHCODRAFT_85278.

    Phylogenomic databases

    KOi K01176.
    OrthoDBi EOG7RBZJ4.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013777. A-amylase_fun.
    IPR015340. A_amylase_DUF1966_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09260. DUF1966. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001024. Alph-amyl_fung. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H4-8 / FGSC 9210Imported.

    Entry informationi

    Entry nameiD8Q5Z0_SCHCM
    AccessioniPrimary (citable) accession number: D8Q5Z0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3