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D8Q478 (D8Q478_SCHCM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SCHCODRAFT_108800 EMBL EFI96752.1
OrganismSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus) [Complete proteome]
Taxonomic identifier578458 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum

Protein attributes

Sequence length543 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5431 EMBL EFI96752.1

Sequences

Sequence LengthMass (Da)Tools
D8Q478 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 69CA72DC030A44CD

FASTA54361,503
        10         20         30         40         50         60 
MFSDLHKRFA NVFRPGHRRT QSAARPTGGG GATPAAAAPP PAAHHAAGPG LSRMRLGTED 

        70         80         90        100        110        120 
DPEQNPLMIE FFTWDALRDD MSWWQHLEQE LPEMARMGIT QVWIPPPNKA AAKTGRGYDA 

       130        140        150        160        170        180 
YDIWDLGEFD QKGMVRTRWG SKEELLRACR TAKQVKVDVI VDAVINHKLG ADRVETFPAV 

       190        200        210        220        230        240 
RVDTQNRLKE LSKVHEIEGW TAFDFPGRGD KVGFTSYTGL DWDQRTQQQG IYRIAGKGHH 

       250        260        270        280        290        300 
GWSRNVGTEF GNYDYLLGVD IDHRHPEVQE DFLRWGPWML ETLGAAGFRI DAAKHIDYKF 

       310        320        330        340        350        360 
MLQWITATRR NAQEPRMFCV CEFWSGDVKL ILPYIRAFKG EAVFFDVPLH MRLCEASRKR 

       370        380        390        400        410        420 
ERYDLRDLMS STLARLRPGD AVTFVDNHDT VEGMDLESWV EENFKIQAYA LILLRPEGYP 

       430        440        450        460        470        480 
CIFYGDLYPN KKCYNANTAA NLRRLIEARR LYAYGPVQDY NAGKNCIGFV RGGTGRHPGC 

       490        500        510        520        530        540 
VVLLSNRDEA GPLHTIRMNV GPARAGAIYR SYMTQGGEVQ IDAHGWGEFS CFANAVQVWV 


PAA 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL377306 Genomic DNA. Translation: EFI96752.1.
RefSeqXP_003031655.1. XM_003031609.1.

3D structure databases

ProteinModelPortalD8Q478.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9589433.
KEGGscm:SCHCODRAFT_108800.

Phylogenomic databases

KOK01176.
OrthoDBEOG7RBZJ4.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8Q478_SCHCM
AccessionPrimary (citable) accession number: D8Q478
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 13, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)