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D8Q478

- D8Q478_SCHCM

UniProt

D8Q478 - D8Q478_SCHCM

Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene

SCHCODRAFT_108800

Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 13 proteinImported
    Gene namesi
    ORF Names:SCHCODRAFT_108800Imported
    OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)Imported
    Taxonomic identifieri578458 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
    ProteomesiUP000007431: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliD8Q478.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OrthoDBiEOG7RBZJ4.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    D8Q478-1 [UniParc]FASTAAdd to Basket

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    MFSDLHKRFA NVFRPGHRRT QSAARPTGGG GATPAAAAPP PAAHHAAGPG    50
    LSRMRLGTED DPEQNPLMIE FFTWDALRDD MSWWQHLEQE LPEMARMGIT 100
    QVWIPPPNKA AAKTGRGYDA YDIWDLGEFD QKGMVRTRWG SKEELLRACR 150
    TAKQVKVDVI VDAVINHKLG ADRVETFPAV RVDTQNRLKE LSKVHEIEGW 200
    TAFDFPGRGD KVGFTSYTGL DWDQRTQQQG IYRIAGKGHH GWSRNVGTEF 250
    GNYDYLLGVD IDHRHPEVQE DFLRWGPWML ETLGAAGFRI DAAKHIDYKF 300
    MLQWITATRR NAQEPRMFCV CEFWSGDVKL ILPYIRAFKG EAVFFDVPLH 350
    MRLCEASRKR ERYDLRDLMS STLARLRPGD AVTFVDNHDT VEGMDLESWV 400
    EENFKIQAYA LILLRPEGYP CIFYGDLYPN KKCYNANTAA NLRRLIEARR 450
    LYAYGPVQDY NAGKNCIGFV RGGTGRHPGC VVLLSNRDEA GPLHTIRMNV 500
    GPARAGAIYR SYMTQGGEVQ IDAHGWGEFS CFANAVQVWV PAA 543
    Length:543
    Mass (Da):61,503
    Last modified:October 5, 2010 - v1
    Checksum:i69CA72DC030A44CD
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei543 – 5431Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377306 Genomic DNA. Translation: EFI96752.1.
    RefSeqiXP_003031655.1. XM_003031609.1.

    Genome annotation databases

    GeneIDi9589433.
    KEGGiscm:SCHCODRAFT_108800.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL377306 Genomic DNA. Translation: EFI96752.1 .
    RefSeqi XP_003031655.1. XM_003031609.1.

    3D structure databases

    ProteinModelPortali D8Q478.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 9589433.
    KEGGi scm:SCHCODRAFT_108800.

    Phylogenomic databases

    KOi K01176.
    OrthoDBi EOG7RBZJ4.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H4-8 / FGSC 9210Imported.

    Entry informationi

    Entry nameiD8Q478_SCHCM
    AccessioniPrimary (citable) accession number: D8Q478
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3