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D8Q478

- D8Q478_SCHCM

UniProt

D8Q478 - D8Q478_SCHCM

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Protein
Submitted name:

Glycoside hydrolase family 13 protein

Gene
SCHCODRAFT_108800
Organism
Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 13 proteinImported
Gene namesi
ORF Names:SCHCODRAFT_108800Imported
OrganismiSchizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus)
Taxonomic identifieri578458 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesSchizophyllaceaeSchizophyllum
ProteomesiUP000007431: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD8Q478.

Family & Domainsi

Phylogenomic databases

KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Fragment.

D8Q478-1 [UniParc]FASTAAdd to Basket

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MFSDLHKRFA NVFRPGHRRT QSAARPTGGG GATPAAAAPP PAAHHAAGPG    50
LSRMRLGTED DPEQNPLMIE FFTWDALRDD MSWWQHLEQE LPEMARMGIT 100
QVWIPPPNKA AAKTGRGYDA YDIWDLGEFD QKGMVRTRWG SKEELLRACR 150
TAKQVKVDVI VDAVINHKLG ADRVETFPAV RVDTQNRLKE LSKVHEIEGW 200
TAFDFPGRGD KVGFTSYTGL DWDQRTQQQG IYRIAGKGHH GWSRNVGTEF 250
GNYDYLLGVD IDHRHPEVQE DFLRWGPWML ETLGAAGFRI DAAKHIDYKF 300
MLQWITATRR NAQEPRMFCV CEFWSGDVKL ILPYIRAFKG EAVFFDVPLH 350
MRLCEASRKR ERYDLRDLMS STLARLRPGD AVTFVDNHDT VEGMDLESWV 400
EENFKIQAYA LILLRPEGYP CIFYGDLYPN KKCYNANTAA NLRRLIEARR 450
LYAYGPVQDY NAGKNCIGFV RGGTGRHPGC VVLLSNRDEA GPLHTIRMNV 500
GPARAGAIYR SYMTQGGEVQ IDAHGWGEFS CFANAVQVWV PAA 543
Length:543
Mass (Da):61,503
Last modified:October 5, 2010 - v1
Checksum:i69CA72DC030A44CD
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei543 – 5431Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377306 Genomic DNA. Translation: EFI96752.1.
RefSeqiXP_003031655.1. XM_003031609.1.

Genome annotation databases

GeneIDi9589433.
KEGGiscm:SCHCODRAFT_108800.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL377306 Genomic DNA. Translation: EFI96752.1 .
RefSeqi XP_003031655.1. XM_003031609.1.

3D structure databases

ProteinModelPortali D8Q478.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9589433.
KEGGi scm:SCHCODRAFT_108800.

Phylogenomic databases

KOi K01176.
OrthoDBi EOG7RBZJ4.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H4-8 / FGSC 9210.

Entry informationi

Entry nameiD8Q478_SCHCM
AccessioniPrimary (citable) accession number: D8Q478
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 13, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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