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D8PEE9

- D8PEE9_9BACT

UniProt

D8PEE9 - D8PEE9_9BACT

Protein
Submitted name:

Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein)

Gene

rlp

Organism
Candidatus Nitrospira defluvii
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Enzyme and pathway databases

    BioCyciNDEF330214:GI4U-1849-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein)Imported
    Gene namesi
    Name:rlpImported
    ORF Names:NIDE1881Imported
    OrganismiCandidatus Nitrospira defluviiImported
    Taxonomic identifieri330214 [NCBI]
    Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeNitrospira
    ProteomesiUP000001660: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD8PEE9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000230274.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8PEE9-1 [UniParc]FASTAAdd to Basket

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    MEYRLHGSAA DARRRADLLC IDQTVEAADH VIPSGAIRDQ LLGRVIQLEV    50
    ITPDSHRAVL SFPVELLDGT MSALLHMIIG MAGLQGQIRV TDLSLPDAVA 100
    SRWTRPRYGS RGLRDLLRVP RRPLICAVLK PLGYSPQQLA DLAHEFALGE 150
    VDLIKDDQSL RDHPFCRFDE RIARCAEAIA KASRQTGKRC LYAPHISGPW 200
    PSLVEQAAKA MQAGARALLL CPGLIGFDAV ASLAQLSSLS LPLLAHPDFL 250
    GSHYVTPDSG IAPAMLFGLL PRLAGADVTI YPTYGLNYPI SEEDCRQIAA 300
    ACRRALGGCP PILPTAAGRM TASRIREMVT LYGSDIVFIL GSDLRRGPTP 350
    IRSACLDFRR LVEAETCSSP 370
    Length:370
    Mass (Da):40,145
    Last modified:October 5, 2010 - v1
    Checksum:iE3BF284A07D3F158
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929003 Genomic DNA. Translation: CBK41608.1.
    RefSeqiWP_013248432.1. NC_014355.1.
    YP_003797533.1. NC_014355.1.

    Genome annotation databases

    EnsemblBacteriaiCBK41608; CBK41608; NIDE1881.
    GeneIDi9483805.
    KEGGinde:NIDE1881.
    PATRICi42242777. VBICanNit28252_1774.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929003 Genomic DNA. Translation: CBK41608.1 .
    RefSeqi WP_013248432.1. NC_014355.1.
    YP_003797533.1. NC_014355.1.

    3D structure databases

    ProteinModelPortali D8PEE9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBK41608 ; CBK41608 ; NIDE1881 .
    GeneIDi 9483805.
    KEGGi nde:NIDE1881.
    PATRICi 42242777. VBICanNit28252_1774.

    Phylogenomic databases

    HOGENOMi HOG000230274.
    KOi K01601.

    Enzyme and pathway databases

    BioCyci NDEF330214:GI4U-1849-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria."
      Lucker S., Wagner M., Maixner F., Pelletier E., Koch H., Vacherie B., Rattei T., Sinninghe Damste J., Spieck E., Le Paslier D., Daims H.
      Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD8PEE9_9BACT
    AccessioniPrimary (citable) accession number: D8PEE9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3