D8PEE9 (D8PEE9_9BACT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein) EMBL CBK41608.1

Gene names

Name:	rlp EMBL CBK41608.1
ORF Names:	NIDE1881 EMBL CBK41608.1

Organism

Candidatus Nitrospira defluvii EMBL CBK41608.1

Taxonomic identifier

330214 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Nitrospirae › Nitrospira › Nitrospirales › Nitrospiraceae › Nitrospira

Protein attributes

Sequence length	370 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8PEE9 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: E3BF284A07D3F158	FASTA	370	40,145
	10 20 30 40 50 60 MEYRLHGSAA DARRRADLLC IDQTVEAADH VIPSGAIRDQ LLGRVIQLEV ITPDSHRAVL 70 80 90 100 110 120 SFPVELLDGT MSALLHMIIG MAGLQGQIRV TDLSLPDAVA SRWTRPRYGS RGLRDLLRVP 130 140 150 160 170 180 RRPLICAVLK PLGYSPQQLA DLAHEFALGE VDLIKDDQSL RDHPFCRFDE RIARCAEAIA 190 200 210 220 230 240 KASRQTGKRC LYAPHISGPW PSLVEQAAKA MQAGARALLL CPGLIGFDAV ASLAQLSSLS 250 260 270 280 290 300 LPLLAHPDFL GSHYVTPDSG IAPAMLFGLL PRLAGADVTI YPTYGLNYPI SEEDCRQIAA 310 320 330 340 350 360 ACRRALGGCP PILPTAAGRM TASRIREMVT LYGSDIVFIL GSDLRRGPTP IRSACLDFRR 370 LVEAETCSSP

References

[1]	"A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria." Lucker S., Wagner M., Maixner F., Pelletier E., Koch H., Vacherie B., Rattei T., Sinninghe Damste J., Spieck E., Le Paslier D., Daims H. Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE.
[2]	Genoscope - CEA Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP929003 Genomic DNA. Translation: CBK41608.1.
RefSeq	YP_003797533.1. NC_014355.1.
3D structure databases
ProteinModelPortal	D8PEE9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBK41608; CBK41608; NIDE1881.
GeneID	9483805.
KEGG	nde:NIDE1881.
PATRIC	42242777. VBICanNit28252_1774.
Phylogenomic databases
HOGENOM	HOG000230274.
KO	K01601.
Enzyme and pathway databases
BioCyc	NDEF330214:GI4U-3995-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8PEE9_9BACT

Accession

Primary (citable) accession number: D8PEE9

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)