Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D8PEE9

- D8PEE9_9BACT

UniProt

D8PEE9 - D8PEE9_9BACT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein)

Gene

rlp

Organism
Candidatus Nitrospira defluvii
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciNDEF330214:GI4U-1849-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein)Imported
Gene namesi
Name:rlpImported
ORF Names:NIDE1881Imported
OrganismiCandidatus Nitrospira defluviiImported
Taxonomic identifieri330214 [NCBI]
Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeNitrospira
ProteomesiUP000001660: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD8PEE9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000230274.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

D8PEE9 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEYRLHGSAA DARRRADLLC IDQTVEAADH VIPSGAIRDQ LLGRVIQLEV
60 70 80 90 100
ITPDSHRAVL SFPVELLDGT MSALLHMIIG MAGLQGQIRV TDLSLPDAVA
110 120 130 140 150
SRWTRPRYGS RGLRDLLRVP RRPLICAVLK PLGYSPQQLA DLAHEFALGE
160 170 180 190 200
VDLIKDDQSL RDHPFCRFDE RIARCAEAIA KASRQTGKRC LYAPHISGPW
210 220 230 240 250
PSLVEQAAKA MQAGARALLL CPGLIGFDAV ASLAQLSSLS LPLLAHPDFL
260 270 280 290 300
GSHYVTPDSG IAPAMLFGLL PRLAGADVTI YPTYGLNYPI SEEDCRQIAA
310 320 330 340 350
ACRRALGGCP PILPTAAGRM TASRIREMVT LYGSDIVFIL GSDLRRGPTP
360 370
IRSACLDFRR LVEAETCSSP
Length:370
Mass (Da):40,145
Last modified:October 5, 2010 - v1
Checksum:iE3BF284A07D3F158
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP929003 Genomic DNA. Translation: CBK41608.1.
RefSeqiWP_013248432.1. NC_014355.1.
YP_003797533.1. NC_014355.1.

Genome annotation databases

EnsemblBacteriaiCBK41608; CBK41608; NIDE1881.
GeneIDi9483805.
KEGGinde:NIDE1881.
PATRICi42242777. VBICanNit28252_1774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP929003 Genomic DNA. Translation: CBK41608.1 .
RefSeqi WP_013248432.1. NC_014355.1.
YP_003797533.1. NC_014355.1.

3D structure databases

ProteinModelPortali D8PEE9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBK41608 ; CBK41608 ; NIDE1881 .
GeneIDi 9483805.
KEGGi nde:NIDE1881.
PATRICi 42242777. VBICanNit28252_1774.

Phylogenomic databases

HOGENOMi HOG000230274.
KOi K01601.

Enzyme and pathway databases

BioCyci NDEF330214:GI4U-1849-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria."
    Lucker S., Wagner M., Maixner F., Pelletier E., Koch H., Vacherie B., Rattei T., Sinninghe Damste J., Spieck E., Le Paslier D., Daims H.
    Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8PEE9_9BACT
AccessioniPrimary (citable) accession number: D8PEE9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3