D8PAD8 (D8PAD8_9BACT) Unreviewed, UniProtKB/TrEMBL
Last modified
May 29, 2013.
Version 16.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Histidinol-phosphate aminotransferase HAMAP-Rule MF_01023 EC=2.6.1.9 HAMAP-Rule MF_01023 Alternative name(s): Imidazole acetol-phosphate transaminase HAMAP-Rule MF_01023 | ||||
| Gene names |
| ||||
| Organism | Candidatus Nitrospira defluvii EMBL CBK40197.1 | ||||
| Taxonomic identifier | 330214 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Nitrospirae › Nitrospirales › Nitrospiraceae › Nitrospira![]() |
Protein attributes
| Sequence length | 361 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate. HAMAP-Rule MF_01023 SAAS SAAS005861 |
| Cofactor | Pyridoxal phosphate By similarity. HAMAP-Rule MF_01023 SAAS SAAS005861 |
| Pathway | Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 7/9. HAMAP-Rule MF_01023 SAAS SAAS005861 |
| Subunit structure | Homodimer By similarity. HAMAP-Rule MF_01023 |
| Sequence similarities | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. HAMAP-Rule MF_01023 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Histidine biosynthesis HAMAP-Rule MF_01023 SAAS SAAS005861 |
| Ligand | Pyridoxal phosphate HAMAP-Rule MF_01023 SAAS SAAS005861 |
| Molecular function | Aminotransferase HAMAP-Rule MF_01023 SAAS SAAS005861 EMBL CBK40197.1 Transferase |
| Gene Ontology (GO) | |
| Biological_process | histidine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular_function | L-phenylalanine:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: EC histidinol-phosphate transaminase activityInferred from electronic annotation. Source: HAMAP pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Amino acid modifications | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Modified residue | 224 | 1 | N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01023 | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria." Lucker S., Wagner M., Maixner F., Pelletier E., Koch H., Vacherie B., Rattei T., Sinninghe Damste J., Spieck E., Le Paslier D., Daims H. Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | Genoscope - CEA Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | FP929003 Genomic DNA. Translation: CBK40197.1. |
| RefSeq | YP_003796123.1. NC_014355.1. |
3D structure databases | |
| ProteinModelPortal | D8PAD8. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | CBK40197; CBK40197; NIDE0420. |
| GeneID | 9486413. |
| KEGG | nde:NIDE0420. |
| PATRIC | 42239977. VBICanNit28252_0389. |
Phylogenomic databases | |
| HOGENOM | HOG000288510. |
| KO | K00817. |
Enzyme and pathway databases | |
| BioCyc | NDEF330214:GI4U-417-MONOMER. |
| UniPathway | UPA00031; UER00012. |
Family and domain databases | |
| Gene3D | 3.40.640.10. 1 hit. 3.90.1150.10. 1 hit. |
| HAMAP | MF_01023. HisC_aminotrans_2. |
| InterPro | IPR004839. Aminotransferase_I/II. IPR005861. HisP_aminotrans. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view] |
| Pfam | PF00155. Aminotran_1_2. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR01141. hisC. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | D8PAD8_9BACT | ||||||||
| Accession | Primary (citable) accession number: D8PAD8 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
