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D8NMB7 (D8NMB7_RALSL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L3 RuleBase RU003906 HAMAP-Rule MF_01325
Gene names
Name:rplC HAMAP-Rule MF_01325 EMBL CBJ41737.1
ORF Names:RCFBP_10430 EMBL CBJ41737.1
OrganismRalstonia solanacearum CFBP2957 [Complete proteome] EMBL CBJ41737.1
Taxonomic identifier859656 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Protein attributes

Sequence length220 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01325

Subunit structure

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity. HAMAP-Rule MF_01325

Post-translational modification

Methylated by PrmB By similarity. HAMAP-Rule MF_01325

Sequence similarities

Belongs to the ribosomal protein L3P family. HAMAP-Rule MF_01325 RuleBase RU003905

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue1531N5-methylglutamine By similarity HAMAP-Rule MF_01325

Sequences

Sequence LengthMass (Da)Tools
D8NMB7 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 91CCD01E3CBF68E7

FASTA22022,968
        10         20         30         40         50         60 
MSLGLVGRKV GMTRVFTDDG DSIPVTVLEV GGNRVTQIKT DETDGYTAVQ VTFGSRRASR 

        70         80         90        100        110        120 
VTKPLAGHLA KAGVEAGEII AEFRIDAAKA AELKLGDTID VDLFAAGQKI DVQGTTIGKG 

       130        140        150        160        170        180 
YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD VTRTVQNLVI 

       190        200        210        220 
VRVDAERKLL LVKGAVPGAK SGFVVVSPAV KAKPQVAAAA 

« Hide

References

[1]"Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence."
Remenant B., Coupat-Goutaland B., Guidot A., Cellier G., Wicker E., Allen C., Fegan M., Pruvost O., Elbaz M., Calteau A., Salvignol G., Mornico D., Mangenot S., Barbe V., Medigue C., Prior P.
BMC Genomics 11:379-379(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CFBP2957 EMBL CBJ41737.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP885897 Genomic DNA. Translation: CBJ41737.1.
RefSeqYP_003744381.1. NC_014307.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ41737; CBJ41737; RCFBP_10430.
GeneID9417593.
KEGGrsc:RCFBP_10430.
PATRIC42543706. VBIRalSol166517_0400.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000100368.
KOK02906.

Enzyme and pathway databases

BioCycRSOL859656-WGS:GST9-430-MONOMER.

Family and domain databases

HAMAPMF_01325_B. Ribosomal_L3_B.
InterProIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERPTHR11229. PTHR11229. 1 hit.
PfamPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMSSF50447. SSF50447. 1 hit.
TIGRFAMsTIGR03625. L3_bact. 1 hit.
PROSITEPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8NMB7_RALSL
AccessionPrimary (citable) accession number: D8NMB7
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)