Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L3

Gene

rplC

Organism
Ralstonia solanacearum CFBP2957
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotation

Keywords - Ligandi

RNA-binding, rRNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciRSOL859656-WGS:GST9-430-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L3UniRule annotation
Gene namesi
Name:rplCUniRule annotationImported
ORF Names:RCFBP_10430Imported
OrganismiRalstonia solanacearum CFBP2957Imported
Taxonomic identifieri859656 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000008677: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei153 – 1531N5-methylglutamineUniRule annotation

Post-translational modificationi

Methylated by PrmB.UniRule annotation

Keywords - PTMi

MethylationUniRule annotation

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L3P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000100368.
KOiK02906.

Family and domain databases

HAMAPiMF_01325_B. Ribosomal_L3_B.
InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8NMB7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLGLVGRKV GMTRVFTDDG DSIPVTVLEV GGNRVTQIKT DETDGYTAVQ
60 70 80 90 100
VTFGSRRASR VTKPLAGHLA KAGVEAGEII AEFRIDAAKA AELKLGDTID
110 120 130 140 150
VDLFAAGQKI DVQGTTIGKG YAGTIKRYNF SSGRASHGNS RSHNVPGSIG
160 170 180 190 200
MAQDPGRVFP GKRMTGHMGD VTRTVQNLVI VRVDAERKLL LVKGAVPGAK
210 220
SGFVVVSPAV KAKPQVAAAA
Length:220
Mass (Da):22,968
Last modified:October 5, 2010 - v1
Checksum:i91CCD01E3CBF68E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP885897 Genomic DNA. Translation: CBJ41737.1.
RefSeqiYP_003744381.1. NC_014307.1.

Genome annotation databases

EnsemblBacteriaiCBJ41737; CBJ41737; RCFBP_10430.
GeneIDi9417593.
KEGGirsc:RCFBP_10430.
PATRICi42543706. VBIRalSol166517_0400.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP885897 Genomic DNA. Translation: CBJ41737.1.
RefSeqiYP_003744381.1. NC_014307.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBJ41737; CBJ41737; RCFBP_10430.
GeneIDi9417593.
KEGGirsc:RCFBP_10430.
PATRICi42543706. VBIRalSol166517_0400.

Phylogenomic databases

HOGENOMiHOG000100368.
KOiK02906.

Enzyme and pathway databases

BioCyciRSOL859656-WGS:GST9-430-MONOMER.

Family and domain databases

HAMAPiMF_01325_B. Ribosomal_L3_B.
InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence."
    Remenant B., Coupat-Goutaland B., Guidot A., Cellier G., Wicker E., Allen C., Fegan M., Pruvost O., Elbaz M., Calteau A., Salvignol G., Mornico D., Mangenot S., Barbe V., Medigue C., Prior P.
    BMC Genomics 11:379-379(2010)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CFBP2957Imported.

Entry informationi

Entry nameiD8NMB7_RALSL
AccessioniPrimary (citable) accession number: D8NMB7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.