D8NMB7 (D8NMB7_RALSL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L3 HAMAP-Rule MF_01325

Gene names

Name:	rplC HAMAP-Rule MF_01325 EMBL CBJ41737.1
ORF Names:	RCFBP_10430 EMBL CBJ41737.1

Organism

Ralstonia solanacearum CFBP2957 EMBL CBJ41737.1

Taxonomic identifier

859656 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia › Ralstonia solanacearum

Protein attributes

Sequence length	220 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. RuleBase RU003906 HAMAP-Rule MF_01325
Subunit structure	Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity. RuleBase RU003906 HAMAP-Rule MF_01325
Post-translational modification	Methylated by PrmB By similarity. HAMAP-Rule MF_01325
Sequence similarities	Belongs to the ribosomal protein L3P family. HAMAP-Rule MF_01325 RuleBase RU003905

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU003906 HAMAP-Rule MF_01325
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_01325 RuleBase RU003905
PTM	Methylation HAMAP-Rule MF_01325
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	153	1	N5-methylglutamine By similarity HAMAP-Rule MF_01325

Sequences

	Sequence		Length	Mass (Da)
	D8NMB7 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 91CCD01E3CBF68E7	FASTA	220	22,968
	10 20 30 40 50 60 MSLGLVGRKV GMTRVFTDDG DSIPVTVLEV GGNRVTQIKT DETDGYTAVQ VTFGSRRASR 70 80 90 100 110 120 VTKPLAGHLA KAGVEAGEII AEFRIDAAKA AELKLGDTID VDLFAAGQKI DVQGTTIGKG 130 140 150 160 170 180 YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD VTRTVQNLVI 190 200 210 220 VRVDAERKLL LVKGAVPGAK SGFVVVSPAV KAKPQVAAAA

References

[1]

"Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence." Remenant B., Coupat-Goutaland B., Guidot A., Cellier G., Wicker E., Allen C., Fegan M., Pruvost O., Elbaz M., Calteau A., Salvignol G., Mornico D., Mangenot S., Barbe V., Medigue C., Prior P. BMC Genomics 11:379-379(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: CFBP2957 EMBL CBJ41737.1.

[2]

Genoscope - CEA Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: CFBP2957 EMBL CBJ41737.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP885897 Genomic DNA. Translation: CBJ41737.1.
RefSeq	YP_003744381.1. NC_014307.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBJ41737; CBJ41737; RCFBP_10430.
GeneID	9417593.
KEGG	rsc:RCFBP_10430.
PATRIC	42543706. VBIRalSol166517_0400.
Phylogenomic databases
HOGENOM	HOG000100368.
KO	K02906.
Family and domain databases
HAMAP	MF_01325_B. Ribosomal_L3_B.
InterPro	IPR000597. Ribosomal_L3. IPR019927. Ribosomal_L3_bac/org-type. IPR019926. Ribosomal_L3_CS. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
PANTHER	PTHR11229. PTHR11229. 1 hit.
Pfam	PF00297. Ribosomal_L3. 1 hit. [Graphical view]
SUPFAM	SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR03625. L3_bact. 1 hit.
PROSITE	PS00474. RIBOSOMAL_L3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8NMB7_RALSL

Accession

Primary (citable) accession number: D8NMB7

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)