D8MT05 (D8MT05_ERWBE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	dadB EMBL CAX59962.1
Ordered Locus Names:	EbC_24310 EMBL CAX59962.1

Organism

Erwinia billingiae (strain Eb661) [Complete proteome] [HAMAP]

Taxonomic identifier

634500 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Erwinia › Erwinia billingiae

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL CAX59962.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8MT05 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 23BE7AF852663B05	FASTA	356	38,806
	10 20 30 40 50 60 MSRPIVATVD TSALRHNLAV ARQAAPHSRV WSVVKANAYG HGIDRVWQSF AATDGFALLN 70 80 90 100 110 120 LEEAILLRER GWKKPILLLE GFFHADELAI LDQYRLTTSV HSNWQIQALA KAKLSAPLDI 130 140 150 160 170 180 YLKVNSGMNR LGFAPEQVQQ AWNKLRGLEN VGEMTLMAHF AEAETSEGIE QPLRRIEQAA 190 200 210 220 230 240 EGLDCLRSLA NSAATLWHPH THHDWVRPGI ILYGASPSGK WQDIASSGLQ PVMSLNSEII 250 260 270 280 290 300 AIQNLKTGDG VGYGSRYRAQ GEQRIGVVAC GYADGYPRHA PTGTPVWVDG VRTHTVGAIS 310 320 330 340 350 MDMITVDLTP CLQAGIGSQV ELWGSNIKID EVAESAGTVG YELMCALATR VPVKIS

References

[1]

"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae." Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R. BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Eb661 EMBL CAX59962.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP236843 Genomic DNA. Translation: CAX59962.1.
RefSeq	YP_003741809.1. NC_014306.1.
3D structure databases
ProteinModelPortal	D8MT05.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAX59962; CAX59962; EbC_24310.
GeneID	9426000.
KEGG	ebi:EbC_24310.
PATRIC	42307871. VBIErwBil95213_2771.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031446.
KO	K01775.
Enzyme and pathway databases
BioCyc	EBIL634500:GHYX-2901-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8MT05_ERWBE

Accession

Primary (citable) accession number: D8MT05

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)