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D8MT05 (D8MT05_ERWBE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length356 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1301Substrate By similarity HAMAP-Rule MF_01201
Binding site3011Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D8MT05 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 23BE7AF852663B05

FASTA35638,806
        10         20         30         40         50         60 
MSRPIVATVD TSALRHNLAV ARQAAPHSRV WSVVKANAYG HGIDRVWQSF AATDGFALLN 

        70         80         90        100        110        120 
LEEAILLRER GWKKPILLLE GFFHADELAI LDQYRLTTSV HSNWQIQALA KAKLSAPLDI 

       130        140        150        160        170        180 
YLKVNSGMNR LGFAPEQVQQ AWNKLRGLEN VGEMTLMAHF AEAETSEGIE QPLRRIEQAA 

       190        200        210        220        230        240 
EGLDCLRSLA NSAATLWHPH THHDWVRPGI ILYGASPSGK WQDIASSGLQ PVMSLNSEII 

       250        260        270        280        290        300 
AIQNLKTGDG VGYGSRYRAQ GEQRIGVVAC GYADGYPRHA PTGTPVWVDG VRTHTVGAIS 

       310        320        330        340        350 
MDMITVDLTP CLQAGIGSQV ELWGSNIKID EVAESAGTVG YELMCALATR VPVKIS 

« Hide

References

[1]"Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae."
Kube M., Migdoll A.M., Gehring I., Heitmann K., Mayer Y., Kuhl H., Knaust F., Geider K., Reinhardt R.
BMC Genomics 11:393-393(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Eb661 EMBL CAX59962.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP236843 Genomic DNA. Translation: CAX59962.1.
RefSeqYP_003741809.1. NC_014306.1.

3D structure databases

ProteinModelPortalD8MT05.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAX59962; CAX59962; EbC_24310.
GeneID9426000.
KEGGebi:EbC_24310.
PATRIC42307871. VBIErwBil95213_2771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031446.
KOK01775.
OMAYGHGLER.

Enzyme and pathway databases

BioCycEBIL634500:GHYX-2494-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8MT05_ERWBE
AccessionPrimary (citable) accession number: D8MT05
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)