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Protein
Submitted name:

60S ribosomal protein L37a, expressed

Gene

TAA_ctg0616b.00240.1

Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L37a, expressedImported
Submitted name:
Chromosome 3B, genomic scaffold, cultivar Chinese SpringImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:TAA_ctg0616b.00240.1Imported, TRAES_3BF073800030CFD_c1Imported
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeTriticinaeTriticum
ProteomesiUP000019116 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00Lm1-92[»]
4V7Eelectron microscopy5.50Cp1-92[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiHARYDCS.

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00327. Ribosomal_L37Ae.
InterProiIPR002674. Ribosomal_L37ae.
IPR011331. Ribosomal_L37ae/L37e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01780. Ribosomal_L37ae. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR00280. eL43_euk_arch. 1 hit.

Sequencei

Sequence statusi: Complete.

D8L9P6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKRTKKAGI VGKYGTRYGA SLRKQIKKME VSQHSKYFCE FCGKFAVKRK
60 70 80 90
AVGIWGCKDC GKVKAGGAYT MNTASAVTVR STIRRLREQT EA
Length:92
Mass (Da):10,243
Last modified:October 5, 2010 - v1
Checksum:iEBBC9B226FE3E3DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN564432 Genomic DNA. Translation: CBH32602.1.
HG670306 Genomic DNA. Translation: CDM83941.1.

Genome annotation databases

EnsemblPlantsiTRAES3BF073800030CFD_t1; TRAES3BF073800030CFD_t1; TRAES3BF073800030CFD_g.
Traes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.
Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.
Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.
Traes_7BL_D3C1A3D66.1; Traes_7BL_D3C1A3D66.1; Traes_7BL_D3C1A3D66.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN564432 Genomic DNA. Translation: CBH32602.1.
HG670306 Genomic DNA. Translation: CDM83941.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00Lm1-92[»]
4V7Eelectron microscopy5.50Cp1-92[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiTRAES3BF073800030CFD_t1; TRAES3BF073800030CFD_t1; TRAES3BF073800030CFD_g.
Traes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.
Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.
Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.
Traes_7BL_D3C1A3D66.1; Traes_7BL_D3C1A3D66.1; Traes_7BL_D3C1A3D66.

Phylogenomic databases

OMAiHARYDCS.

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00327. Ribosomal_L37Ae.
InterProiIPR002674. Ribosomal_L37ae.
IPR011331. Ribosomal_L37ae/L37e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01780. Ribosomal_L37ae. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR00280. eL43_euk_arch. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces."
    Genoscope -,C.E.A.
    Choulet F., Wicker T., Rustenholz C., Paux E., Salse J., Leroy P., Schlub S., Le Paslier M.C., Magdelenat G., Gonthier C., Couloux A., Budak H., Breen J., Kong X., Gut M., Brunel D., Anderson J.A., Gill B.S.
    , Appels R., Keller B., Feuillet C.
    Plant Cell 22:1686-1701(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
  3. "The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes."
    Myasnikov A.G., Afonina Z.A., Menetret J.F., Shirokov V.A., Spirin A.S., Klaholz B.P.
    Nat. Commun. 5:5294-5294(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (34.00 ANGSTROMS).
  4. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. EnsemblPlants
    Submitted (JUN-2015) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiD8L9P6_WHEAT
AccessioniPrimary (citable) accession number: D8L9P6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 22, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.