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D8L9P6 (D8L9P6_WHEAT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length92 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein EMBL CBH32602.1
   Technical term3D-structure PDB 3J61
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8L9P6 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: EBBC9B226FE3E3DB

FASTA9210,243
        10         20         30         40         50         60 
MTKRTKKAGI VGKYGTRYGA SLRKQIKKME VSQHSKYFCE FCGKFAVKRK AVGIWGCKDC 

        70         80         90 
GKVKAGGAYT MNTASAVTVR STIRRLREQT EA 

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References

[1]"Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces."
Genoscope -,C.E.A.
Choulet F., Wicker T., Rustenholz C., Paux E., Salse J., Leroy P., Schlub S., Le Paslier M.C., Magdelenat G., Gonthier C., Couloux A., Budak H., Breen J., Kong X., Gut M., Brunel D., Anderson J.A., Gill B.S. expand/collapse author list , Appels R., Keller B., Feuillet C.
Plant Cell 22:1686-1701(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Analysis of the bread wheat genome using whole-genome shotgun sequencing."
Brenchley R., Spannagl M., Pfeifer M., Barker G.L., D'Amore R., Allen A.M., McKenzie N., Kramer M., Kerhornou A., Bolser D., Kay S., Waite D., Trick M., Bancroft I., Gu Y., Huo N., Luo M.C., Sehgal S. expand/collapse author list , Gill B., Kianian S., Anderson O., Kersey P., Dvorak J., McCombie W.R., Hall A., Mayer K.F., Edwards K.J., Bevan M.W., Hall N.
Nature 491:705-710(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Separating homeologs by phasing in the tetraploid wheat transcriptome."
Krasileva K.V., Buffalo V., Bailey P., Pearce S., Ayling S., Tabbita F., Soria M., Wang S., Akhunov E., Uauy C., Dubcovsky J.
Genome Biol. 14:R66-R66(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
[5]EnsemblPlants
Submitted (JAN-2014) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN564432 Genomic DNA. Translation: CBH32602.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3J61electron microscopy5.50p1-92[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsTraes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.2; Traes_1AL_DF31196A4.
Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.1; Traes_1BL_C86F8C02A.
Traes_3B_3EB1D21E6.1; Traes_3B_3EB1D21E6.1; Traes_3B_3EB1D21E6.
Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.1; Traes_7AL_B72D3D89F.

Family and domain databases

Gene3D2.20.25.30. 1 hit.
HAMAPMF_00327. Ribosomal_L37Ae.
InterProIPR002674. Ribosomal_L37ae.
IPR011331. Ribosomal_L37ae/L37e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamPF01780. Ribosomal_L37ae. 1 hit.
[Graphical view]
SUPFAMSSF57829. SSF57829. 1 hit.
TIGRFAMsTIGR00280. L37a. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8L9P6_WHEAT
AccessionPrimary (citable) accession number: D8L9P6
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)