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Protein

Xylose isomerase

Gene

LLNZ_05170

Organism
Lactococcus lactis subsp. cremoris (strain NZ9000)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciLLAC746361:GLFF-1029-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Ordered Locus Names:LLNZ_05170Imported
OrganismiLactococcus lactis subsp. cremoris (strain NZ9000)Imported
Taxonomic identifieri746361 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
ProteomesiUP000007090: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD8KHW1.
SMRiD8KHW1. Positions 2-222.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.
OMAiHYNASEI.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8KHW1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYFNDIAPI KYEGTKTKNM FAFRHYNPEE VVAGKTMEEQ LHFALAFWHT
60 70 80 90 100
ITMDGADPFG SATMERPWDL EGGSELDRAH RRVDAFFEIA EKLGVKYYCF
110 120 130 140 150
HDIDIAPTGN SLKEFYANLD EITDHLLEKQ KETGIKLLWN TANMFSNPRY
160 170 180 190 200
MNGVSTSNRA EVFAYGAAQV KKGLELSKKL DGENYVFWGG REGYESLLNT
210 220 230
DMGLEMDHMA KFFHLAIDYA KWFCCKVLNK E
Length:231
Mass (Da):26,580
Last modified:October 5, 2010 - v1
Checksum:i655829F353438600
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002094 Genomic DNA. Translation: ADJ60007.1.
RefSeqiWP_011834933.1. NC_017949.1.
YP_006356429.1. NC_017949.1.

Genome annotation databases

EnsemblBacteriaiADJ60007; ADJ60007; LLNZ_05170.
GeneIDi13019654.
KEGGilln:LLNZ_05170.
PATRICi43095510. VBILacLac151604_1037.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002094 Genomic DNA. Translation: ADJ60007.1.
RefSeqiWP_011834933.1. NC_017949.1.
YP_006356429.1. NC_017949.1.

3D structure databases

ProteinModelPortaliD8KHW1.
SMRiD8KHW1. Positions 2-222.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADJ60007; ADJ60007; LLNZ_05170.
GeneIDi13019654.
KEGGilln:LLNZ_05170.
PATRICi43095510. VBILacLac151604_1037.

Phylogenomic databases

KOiK01805.
OMAiHYNASEI.

Enzyme and pathway databases

BioCyciLLAC746361:GLFF-1029-MONOMER.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequences of Lactococcus lactis MG1363 (revised) and NZ9000 and comparative physiological studies."
    Linares D.M., Kok J., Poolman B.
    J. Bacteriol. 192:5806-5812(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NZ9000Imported.

Entry informationi

Entry nameiD8KHW1_LACLN
AccessioniPrimary (citable) accession number: D8KHW1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: February 4, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.