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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Nwat_2772

Organism
Nitrosococcus watsoni (strain C-113)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciNWAT105559:GHXU-2821-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Nwat_2772Imported
OrganismiNitrosococcus watsoni (strain C-113)Imported
Taxonomic identifieri105559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000000393 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi105559.Nwat_2772.

Structurei

3D structure databases

ProteinModelPortaliD8KAW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 152127RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini162 – 469308RuBisCO_largeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
KOiK01601.
OMAiQACDAYL.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8KAW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKSETMAEG KERYQSGVIP YKKMGYWEPD YQPKETDIIA MFRITPQPGV
60 70 80 90 100
DPEEAAAAVA GESSTATWTV VWTDRLTACE LYRAKAYRID PVPNTGEGTK
110 120 130 140 150
NEAQYFAYIA YDLDLFEPGS IANLTASIIG NVFGFKAVKA LRLEDMRIPV
160 170 180 190 200
AYLKTFQGPA TGVVVERERL DKFGRPLLGA TTKPKLGLSG RNYGRVVYEA
210 220 230 240 250
LKGGLDFVKD DENINSQPFM HWRDRFLYCM EAVNKASAAT GEVKGHYLNV
260 270 280 290 300
TAATMEDMYE RAEFAKSLGS VIIMIDLVVG YTAIQSMAKW ARKNDMILHL
310 320 330 340 350
HRAGNSTYSR QKNHGMNFRV ICKWMRMAGV DHIHAGTVVG KLEGDPLMIK
360 370 380 390 400
GFYDTLLDSH TPTSLEHGLF FDQDWASLNK VMPVASGGIH AGQMHQLIQY
410 420 430 440 450
LGEDVILQFG GGTIGHPQGI QAGAVANRVA LEAMILARNE GRDYVKEGPQ
460 470 480 490
ILQDAAKWCS PLKAALDTWK DVTFNYESTD TADFVPTATA SV
Length:492
Mass (Da):54,425
Last modified:October 5, 2010 - v1
Checksum:i2ED50814934759BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002086 Genomic DNA. Translation: ADJ29538.1.
RefSeqiWP_013221603.1. NC_014315.1.

Genome annotation databases

EnsemblBacteriaiADJ29538; ADJ29538; Nwat_2772.
KEGGinwa:Nwat_2772.
PATRICi42238239. VBINitWat28885_2971.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002086 Genomic DNA. Translation: ADJ29538.1.
RefSeqiWP_013221603.1. NC_014315.1.

3D structure databases

ProteinModelPortaliD8KAW1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi105559.Nwat_2772.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADJ29538; ADJ29538; Nwat_2772.
KEGGinwa:Nwat_2772.
PATRICi42238239. VBINitWat28885_2971.

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
KOiK01601.
OMAiQACDAYL.

Enzyme and pathway databases

BioCyciNWAT105559:GHXU-2821-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Nitrosococcus watsoni C-113."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Malfatti S.A., Chain P.S.G., Land M., Hauser L., Kyrpides N., Ivanova N., Cambell M.A., Heidelberg J.F., Klotz M.G., Woyke T.
    Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C-113Imported.

Entry informationi

Entry nameiD8KAW1_NITWC
AccessioniPrimary (citable) accession number: D8KAW1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: December 9, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.