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D8K8Y1 (D8K8Y1_NITWC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.4.1.129 EMBL ADJ27191.1
Gene names
Ordered Locus Names:Nwat_0221 EMBL ADJ27191.1
OrganismNitrosococcus watsoni (strain C-113) [Complete proteome] [HAMAP]
Taxonomic identifier105559 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length570 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D8K8Y1 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 0C527A41F7B22A7C

FASTA57062,875
        10         20         30         40         50         60 
MVSRRERDKN YPGRLGVVGL AFAVAVAGLA WRLVELQVLD CDFLRGEGEA RHLRVVEMPA 

        70         80         90        100        110        120 
HRGIITDRHG EPLAVSTPVA SIWFNPRLLG EAREQWRALA EAAGVSMAHL EKRMKEGGRR 

       130        140        150        160        170        180 
EFVYLNRWVE PDVAQRVQAL EVPGVNLQSE YRRYYPTGPV AAHVVGFTNI DDRGQEGLEL 

       190        200        210        220        230        240 
ALDETLRGIP GKKRVIQDSR GRVVEDVENL RVPRPGQDLR LSIDLRLQYL AYRELKTAVQ 

       250        260        270        280        290        300 
DHNARAGSLV ILDVGTGEVL AMVNQPSYNP NDRAQLKSHL YRNRAVTDLF EPGSTIKPFT 

       310        320        330        340        350        360 
IGVALESGKY YPHTPIDTAP GYFRVGRYTI RDSRDYGRID VSTVIKKSSN VGASKIALSL 

       370        380        390        400        410        420 
DPMRLWQGFY QAGLGTSTAS GFPGEAEGHL PRSRTFPFRE IEQATLAFGY GLSVTPLQLA 

       430        440        450        460        470        480 
RAYAALGAGG ELKPVSFLYR EQAVREHQVW SEGIAPTVLS MLEEVVSDGG TGERAYVPSY 

       490        500        510        520        530        540 
RVAGKTGTVK KATRGGYAKE RYLAVFAGLI PASHPRLAAV VLIDEPQGKY YGGQVAAPVF 

       550        560        570 
SKVMIGAMRL LNIAPDNLPP LHLAERENTE 

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References

[1]"Complete sequence of chromosome of Nitrosococcus watsoni C-113."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Malfatti S.A., Chain P.S.G., Land M., Hauser L., Kyrpides N., Ivanova N., Cambell M.A., Heidelberg J.F., Klotz M.G., Woyke T.
Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C-113 EMBL ADJ27191.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002086 Genomic DNA. Translation: ADJ27191.1.
RefSeqYP_003759512.1. NC_014315.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ27191; ADJ27191; Nwat_0221.
GeneID9391673.
KEGGnwa:Nwat_0221.
PATRIC42232701. VBINitWat28885_0242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03587.

Enzyme and pathway databases

BioCycNWAT105559:GHXU-277-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56519. PBP_dimer. 1 hit.
SSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8K8Y1_NITWC
AccessionPrimary (citable) accession number: D8K8Y1
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)