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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Dehly_0468

Organism
Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciDLYK552811:GH8P-484-MONOMER.

Protein family/group databases

REBASEi26846. DlyBLORF468P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Dehly_0468Imported
OrganismiDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)Imported
Taxonomic identifieri552811 [NCBI]
Taxonomic lineageiBacteriaChloroflexiDehalococcoidiaDehalogenimonas
ProteomesiUP000002349: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8JZK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELNFDPSIA ASYHSPTQKA RVLTEGWVAG QSYCPNCGHR QLNQFEAGRR
60 70 80 90 100
VADFFCSVCG EEFELKSKKS VLTGRVVDGA FSAMMERLTS RTNPNLFLMN
110 120 130 140 150
YDAISHSVTD FLVVPKHFFT PTIIEKRKAL SPTARRAGWV GCNILIDDIP
160 170 180 190 200
RPGRIYLVRN RNIEPLSDVM ATWQKTLFLR EETNFDSKGW LLDIMSCMDK
210 220 230 240 250
LNSNEFKLSQ IYEFTPILEK LHPDNHHIKD KIRQQLQVLR DRGLLEFLGN

GHYRLK
Length:256
Mass (Da):29,483
Last modified:October 5, 2010 - v1
Checksum:iDCA4EB58AEC532C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002084 Genomic DNA. Translation: ADJ25784.1.
RefSeqiYP_003758105.1. NC_014314.1.

Genome annotation databases

EnsemblBacteriaiADJ25784; ADJ25784; Dehly_0468.
GeneIDi9390157.
KEGGidly:Dehly_0468.
PATRICi42249239. VBIDehLyk78720_0493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002084 Genomic DNA. Translation: ADJ25784.1.
RefSeqiYP_003758105.1. NC_014314.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi26846. DlyBLORF468P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADJ25784; ADJ25784; Dehly_0468.
GeneIDi9390157.
KEGGidly:Dehly_0468.
PATRICi42249239. VBIDehLyk78720_0493.

Phylogenomic databases

HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.

Enzyme and pathway databases

BioCyciDLYK552811:GH8P-484-MONOMER.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Dehalogenimonas lykanthroporepellens BL-DC-9."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Rainey F.A., Yan J., da Costa M.S., Moe W.M., Woyke T.
    Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1523 / JCM 15061 / BL-DC-9Imported.

Entry informationi

Entry nameiD8JZK6_DEHLB
AccessioniPrimary (citable) accession number: D8JZK6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.