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D8JYX4

- D8JYX4_HYPDA

UniProt

D8JYX4 - D8JYX4_HYPDA

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Protein
Submitted name:

Radical SAM domain protein

Gene
Hden_1773
Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. iron-sulfur cluster binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHDEN582899:GIWL-1793-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Radical SAM domain proteinImported
Gene namesi
Ordered Locus Names:Hden_1773Imported
OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
Taxonomic identifieri582899 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000002033: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD8JYX4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000086694.
KOiK01012.
OMAiDDIPLWY.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR010722. BATS_dom.
IPR006638. Elp3/MiaB/NifB.
IPR007197. rSAM.
[Graphical view]
PfamiPF06968. BATS. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8JYX4-1 [UniParc]FASTAAdd to Basket

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MDFSELIAQV TRPDPPKELA LQLLQRSREP ALALQLFAAA SKIRDETMGK    50
TLWWSAGISS MMPCRVEPLC TYCTYFTVKS FPLDELVASV KAIEDLGIRH 100
LHLSGGTDLA GYDNELCEAV NAIRDVSSIE IEINLGPSLT RNGVRRLKQL 150
GVASITSSLE TFNPEIFAKA KPGDSLDARK ALIEMCQDEG MPVRSMILVG 200
LGESEADRID HLYWLLQFPR LYHLRFSRFM PYRGTSWEDH PRCSPWEVAR 250
LVAVARLLMP HVDLGLAAGN SPDDIPLWYA AGGGNQVLGA SVSMRQGRVK 300
AQPGETVIPV TDRVSLVSRM GHIEQFVRGL GRDIGSAAPQ LR 342
Length:342
Mass (Da):37,782
Last modified:October 5, 2010 - v1
Checksum:i6FB646A83E507316
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002083 Genomic DNA. Translation: ADJ23576.1.
RefSeqiYP_003755897.1. NC_014313.1.

Genome annotation databases

EnsemblBacteriaiADJ23576; ADJ23576; Hden_1773.
GeneIDi9387666.
KEGGihdn:Hden_1773.
PATRICi42372179. VBIHypDen91677_1824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002083 Genomic DNA. Translation: ADJ23576.1 .
RefSeqi YP_003755897.1. NC_014313.1.

3D structure databases

ProteinModelPortali D8JYX4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ23576 ; ADJ23576 ; Hden_1773 .
GeneIDi 9387666.
KEGGi hdn:Hden_1773.
PATRICi 42372179. VBIHypDen91677_1824.

Phylogenomic databases

HOGENOMi HOG000086694.
KOi K01012.
OMAi DDIPLWY.

Enzyme and pathway databases

BioCyci HDEN582899:GIWL-1793-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR010722. BATS_dom.
IPR006638. Elp3/MiaB/NifB.
IPR007197. rSAM.
[Graphical view ]
Pfami PF06968. BATS. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view ]
SMARTi SM00729. Elp3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415.

Entry informationi

Entry nameiD8JYX4_HYPDA
AccessioniPrimary (citable) accession number: D8JYX4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3