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D8JYX4

- D8JYX4_HYPDA

UniProt

D8JYX4 - D8JYX4_HYPDA

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Protein
Submitted name:

Radical SAM domain protein

Gene

Hden_1773

Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. iron-sulfur cluster binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHDEN582899:GIWL-1793-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Radical SAM domain proteinImported
Gene namesi
Ordered Locus Names:Hden_1773Imported
OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
Taxonomic identifieri582899 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000002033: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD8JYX4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000086694.
KOiK01012.
OMAiDDIPLWY.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR010722. BATS_dom.
IPR006638. Elp3/MiaB/NifB.
IPR007197. rSAM.
[Graphical view]
PfamiPF06968. BATS. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8JYX4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDFSELIAQV TRPDPPKELA LQLLQRSREP ALALQLFAAA SKIRDETMGK
60 70 80 90 100
TLWWSAGISS MMPCRVEPLC TYCTYFTVKS FPLDELVASV KAIEDLGIRH
110 120 130 140 150
LHLSGGTDLA GYDNELCEAV NAIRDVSSIE IEINLGPSLT RNGVRRLKQL
160 170 180 190 200
GVASITSSLE TFNPEIFAKA KPGDSLDARK ALIEMCQDEG MPVRSMILVG
210 220 230 240 250
LGESEADRID HLYWLLQFPR LYHLRFSRFM PYRGTSWEDH PRCSPWEVAR
260 270 280 290 300
LVAVARLLMP HVDLGLAAGN SPDDIPLWYA AGGGNQVLGA SVSMRQGRVK
310 320 330 340
AQPGETVIPV TDRVSLVSRM GHIEQFVRGL GRDIGSAAPQ LR
Length:342
Mass (Da):37,782
Last modified:October 5, 2010 - v1
Checksum:i6FB646A83E507316
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002083 Genomic DNA. Translation: ADJ23576.1.
RefSeqiWP_013215735.1. NC_014313.1.
YP_003755897.1. NC_014313.1.

Genome annotation databases

EnsemblBacteriaiADJ23576; ADJ23576; Hden_1773.
GeneIDi9387666.
KEGGihdn:Hden_1773.
PATRICi42372179. VBIHypDen91677_1824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002083 Genomic DNA. Translation: ADJ23576.1 .
RefSeqi WP_013215735.1. NC_014313.1.
YP_003755897.1. NC_014313.1.

3D structure databases

ProteinModelPortali D8JYX4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ23576 ; ADJ23576 ; Hden_1773 .
GeneIDi 9387666.
KEGGi hdn:Hden_1773.
PATRICi 42372179. VBIHypDen91677_1824.

Phylogenomic databases

HOGENOMi HOG000086694.
KOi K01012.
OMAi DDIPLWY.

Enzyme and pathway databases

BioCyci HDEN582899:GIWL-1793-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR010722. BATS_dom.
IPR006638. Elp3/MiaB/NifB.
IPR007197. rSAM.
[Graphical view ]
Pfami PF06968. BATS. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view ]
SMARTi SM00729. Elp3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415Imported.

Entry informationi

Entry nameiD8JYX4_HYPDA
AccessioniPrimary (citable) accession number: D8JYX4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3