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D8JX49

- D8JX49_HYPDA

UniProt

D8JX49 - D8JX49_HYPDA

Protein

Superoxide dismutase [Cu-Zn]

Gene

Hden_1373

Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciHDEN582899:GIWL-1392-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Hden_1373Imported
    OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
    Taxonomic identifieri582899 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
    ProteomesiUP000002033: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525 PotentialImportedAdd
    BLAST
    Chaini26 – 178153 PotentialImportedPRO_5000614346Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliD8JX49.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000263449.
    KOiK04565.
    OMAiHWDPDET.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    D8JX49-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRRALHLVL GCCFGIALSA SAYAADVSVD INKITPDGVG DKIGTVVISE    50
    KSGGGLQFKV DITGVTPGEH GFHVHATGDC AAQTKDGKLQ AGLAAGPHYD 100
    PTSSKSHKGP TGQGHKGDLP FLTATDKGIN VVVSAPHLTL ADVSGRALMI 150
    HEGGDNYTDH PENGGGKGRI ACGVVPKS 178
    Length:178
    Mass (Da):18,129
    Last modified:October 5, 2010 - v1
    Checksum:i056FEAB63DF0717E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002083 Genomic DNA. Translation: ADJ23185.1.
    RefSeqiYP_003755506.1. NC_014313.1.

    Genome annotation databases

    EnsemblBacteriaiADJ23185; ADJ23185; Hden_1373.
    GeneIDi9387265.
    KEGGihdn:Hden_1373.
    PATRICi42371375. VBIHypDen91677_1424.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002083 Genomic DNA. Translation: ADJ23185.1 .
    RefSeqi YP_003755506.1. NC_014313.1.

    3D structure databases

    ProteinModelPortali D8JX49.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADJ23185 ; ADJ23185 ; Hden_1373 .
    GeneIDi 9387265.
    KEGGi hdn:Hden_1373.
    PATRICi 42371375. VBIHypDen91677_1424.

    Phylogenomic databases

    HOGENOMi HOG000263449.
    KOi K04565.
    OMAi HWDPDET.

    Enzyme and pathway databases

    BioCyci HDEN582899:GIWL-1392-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415Imported.

    Entry informationi

    Entry nameiD8JX49_HYPDA
    AccessioniPrimary (citable) accession number: D8JX49
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3