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D8JX49

- D8JX49_HYPDA

UniProt

D8JX49 - D8JX49_HYPDA

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Protein

Superoxide dismutase [Cu-Zn]

Gene

Hden_1373

Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Note: Binds 1 copper ion per subunit.UniRule annotation
  • Note: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciHDEN582899:GIWL-1392-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Hden_1373Imported
OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
Taxonomic identifieri582899 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000002033: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 178153 PotentialImportedPRO_5000614346Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliD8JX49.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000263449.
KOiK04565.
OMAiHWDPDET.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D8JX49-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKRRALHLVL GCCFGIALSA SAYAADVSVD INKITPDGVG DKIGTVVISE
60 70 80 90 100
KSGGGLQFKV DITGVTPGEH GFHVHATGDC AAQTKDGKLQ AGLAAGPHYD
110 120 130 140 150
PTSSKSHKGP TGQGHKGDLP FLTATDKGIN VVVSAPHLTL ADVSGRALMI
160 170
HEGGDNYTDH PENGGGKGRI ACGVVPKS
Length:178
Mass (Da):18,129
Last modified:October 5, 2010 - v1
Checksum:i056FEAB63DF0717E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002083 Genomic DNA. Translation: ADJ23185.1.
RefSeqiYP_003755506.1. NC_014313.1.

Genome annotation databases

EnsemblBacteriaiADJ23185; ADJ23185; Hden_1373.
GeneIDi9387265.
KEGGihdn:Hden_1373.
PATRICi42371375. VBIHypDen91677_1424.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002083 Genomic DNA. Translation: ADJ23185.1 .
RefSeqi YP_003755506.1. NC_014313.1.

3D structure databases

ProteinModelPortali D8JX49.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ23185 ; ADJ23185 ; Hden_1373 .
GeneIDi 9387265.
KEGGi hdn:Hden_1373.
PATRICi 42371375. VBIHypDen91677_1424.

Phylogenomic databases

HOGENOMi HOG000263449.
KOi K04565.
OMAi HWDPDET.

Enzyme and pathway databases

BioCyci HDEN582899:GIWL-1392-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415Imported.

Entry informationi

Entry nameiD8JX49_HYPDA
AccessioniPrimary (citable) accession number: D8JX49
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 26, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3