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D8JX49 (D8JX49_HYPDA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393
Gene names
Ordered Locus Names:Hden_1373
OrganismHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) [Complete proteome] [HAMAP]
Taxonomic identifier582899 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Hyphomicrobiaceae › Hyphomicrobium ›

Protein attributes

Sequence length178 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ADJ23185.1
Chain26 – 178153 Potential EMBL ADJ23185.1
PRO_5000614346

Sequences

Sequence LengthMass (Da)Tools
D8JX49 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 056FEAB63DF0717E

FASTA17818,129
        10         20         30         40         50         60 
MKRRALHLVL GCCFGIALSA SAYAADVSVD INKITPDGVG DKIGTVVISE KSGGGLQFKV 

        70         80         90        100        110        120 
DITGVTPGEH GFHVHATGDC AAQTKDGKLQ AGLAAGPHYD PTSSKSHKGP TGQGHKGDLP 

       130        140        150        160        170 
FLTATDKGIN VVVSAPHLTL ADVSGRALMI HEGGDNYTDH PENGGGKGRI ACGVVPKS

« Hide

References

[1]"Genome sequences of eight morphologically diverse alphaproteobacteria."
US DOE Joint Genome Institute
Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.
J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002083 Genomic DNA. Translation: ADJ23185.1.
RefSeqYP_003755506.1. NC_014313.1.

3D structure databases

ProteinModelPortalD8JX49.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ23185; ADJ23185; Hden_1373.
GeneID9387265.
KEGGhdn:Hden_1373.
PATRIC42371375. VBIHypDen91677_1424.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263449.
KOK04565.
OMAALMIHEG.

Enzyme and pathway databases

BioCycHDEN582899:GIWL-1392-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperones.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SOD_Cu_Zn. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8JX49_HYPDA
AccessionPrimary (citable) accession number: D8JX49
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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