D8JV68 (D8JV68_HYPDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL ADJ22884.1

Gene names

Ordered Locus Names:

Hden_1070

Organism

Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) [Complete proteome] [HAMAP]

Taxonomic identifier

582899 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Hyphomicrobiaceae › Hyphomicrobium › Hyphomicrobium denitrificans

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	D8JV68 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: D2AC0EA6014CC288	FASTA	562	62,167
	10 20 30 40 50 60 MASKQLSEYR AKRDFTKTAE PSGAKSVRPA KHLRFVIQKH DATRLHYDLR LELDGVFKSW 70 80 90 100 110 120 AVTKGPSLDP KVKRLAVEVE DHPLDYGDFE GTIPKGQYGG GTVMLWDRGF WAPLGDETPE 130 140 150 160 170 180 QQLRKGDLKF VLVGDKLEGS WVLVRIKNDR AGNKRTNWLL IKHRDQIAKP GDDDSILEKD 190 200 210 220 230 240 RSVASGRSMT DIAAGRGKGP EPFISKRRHA AKPDAIWNSN RADGQAKEDE KKPVPLRRVL 250 260 270 280 290 300 VKKTTKADNR PASQRSAKSN DGGPNTVCGI TISNPDKKLW PANTGAAVSK LDLAHYLEAV 310 320 330 340 350 360 GPWMLEHIKG RPCSVIRAPD GIDGETFFQR HAMRGMSSEI DLVRISGDRE PYIEVNSVEA 370 380 390 400 410 420 LVALGQIAAL EFHPWNCEPL EPDVPGRLVF DLDPAPDVPF DRVVDAANEL RERLQAIGLV 430 440 450 460 470 480 PFCKTTGGKG LHVVTPLKPR RGDGIGWNEA KTFAGALCQQ MAADDPKSYL IKMTKKLRTG 490 500 510 520 530 540 RIFLDYLRND RMATAVAPLS PRARPGATVS MPLTWSQVRK GLDPARFTVH TVPDLLAKSK 550 560 AWNDYCDSCR PLGAAIKSLL GK

References

[1]

"Genome sequences of eight morphologically diverse alphaproteobacteria." US DOE Joint Genome Institute Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V. J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002083 Genomic DNA. Translation: ADJ22884.1.
RefSeq	YP_003755205.1. NC_014313.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADJ22884; ADJ22884; Hden_1070.
GeneID	9386958.
KEGG	hdn:Hden_1070.
PATRIC	42370753. VBIHypDen91677_1117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222509.
KO	K01971.
OMA	NCEPLEP.
Enzyme and pathway databases
BioCyc	HDEN582899:GIWL-1085-MONOMER.
Family and domain databases
InterPro	IPR014144. LigD_PE_domain. IPR014145. LigD_pol. [Graphical view]
Pfam	PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8JV68_HYPDA

Accession

Primary (citable) accession number: D8JV68

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)