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D8JV68

- D8JV68_HYPDA

UniProt

D8JV68 - D8JV68_HYPDA

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Hden_1070

Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciHDEN582899:GIWL-1085-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:Hden_1070Imported
    OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
    Taxonomic identifieri582899 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
    ProteomesiUP000002033: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiFDDTRAW.

    Family and domain databases

    InterProiIPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8JV68-1 [UniParc]FASTAAdd to Basket

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    MASKQLSEYR AKRDFTKTAE PSGAKSVRPA KHLRFVIQKH DATRLHYDLR    50
    LELDGVFKSW AVTKGPSLDP KVKRLAVEVE DHPLDYGDFE GTIPKGQYGG 100
    GTVMLWDRGF WAPLGDETPE QQLRKGDLKF VLVGDKLEGS WVLVRIKNDR 150
    AGNKRTNWLL IKHRDQIAKP GDDDSILEKD RSVASGRSMT DIAAGRGKGP 200
    EPFISKRRHA AKPDAIWNSN RADGQAKEDE KKPVPLRRVL VKKTTKADNR 250
    PASQRSAKSN DGGPNTVCGI TISNPDKKLW PANTGAAVSK LDLAHYLEAV 300
    GPWMLEHIKG RPCSVIRAPD GIDGETFFQR HAMRGMSSEI DLVRISGDRE 350
    PYIEVNSVEA LVALGQIAAL EFHPWNCEPL EPDVPGRLVF DLDPAPDVPF 400
    DRVVDAANEL RERLQAIGLV PFCKTTGGKG LHVVTPLKPR RGDGIGWNEA 450
    KTFAGALCQQ MAADDPKSYL IKMTKKLRTG RIFLDYLRND RMATAVAPLS 500
    PRARPGATVS MPLTWSQVRK GLDPARFTVH TVPDLLAKSK AWNDYCDSCR 550
    PLGAAIKSLL GK 562
    Length:562
    Mass (Da):62,167
    Last modified:October 5, 2010 - v1
    Checksum:iD2AC0EA6014CC288
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002083 Genomic DNA. Translation: ADJ22884.1.
    RefSeqiWP_013215099.1. NC_014313.1.
    YP_003755205.1. NC_014313.1.

    Genome annotation databases

    EnsemblBacteriaiADJ22884; ADJ22884; Hden_1070.
    GeneIDi9386958.
    KEGGihdn:Hden_1070.
    PATRICi42370753. VBIHypDen91677_1117.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002083 Genomic DNA. Translation: ADJ22884.1 .
    RefSeqi WP_013215099.1. NC_014313.1.
    YP_003755205.1. NC_014313.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADJ22884 ; ADJ22884 ; Hden_1070 .
    GeneIDi 9386958.
    KEGGi hdn:Hden_1070.
    PATRICi 42370753. VBIHypDen91677_1117.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi FDDTRAW.

    Enzyme and pathway databases

    BioCyci HDEN582899:GIWL-1085-MONOMER.

    Family and domain databases

    InterProi IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415Imported.

    Entry informationi

    Entry nameiD8JV68_HYPDA
    AccessioniPrimary (citable) accession number: D8JV68
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3