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D8JV68

- D8JV68_HYPDA

UniProt

D8JV68 - D8JV68_HYPDA

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Protein
Submitted name: DNA polymerase LigD, polymerase domain protein
Gene
Hden_1070
Organism
Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciHDEN582899:GIWL-1085-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Hden_1070Imported
OrganismiHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)Imported
Taxonomic identifieri582899 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000002033: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiFDDTRAW.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D8JV68-1 [UniParc]FASTAAdd to Basket

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MASKQLSEYR AKRDFTKTAE PSGAKSVRPA KHLRFVIQKH DATRLHYDLR    50
LELDGVFKSW AVTKGPSLDP KVKRLAVEVE DHPLDYGDFE GTIPKGQYGG 100
GTVMLWDRGF WAPLGDETPE QQLRKGDLKF VLVGDKLEGS WVLVRIKNDR 150
AGNKRTNWLL IKHRDQIAKP GDDDSILEKD RSVASGRSMT DIAAGRGKGP 200
EPFISKRRHA AKPDAIWNSN RADGQAKEDE KKPVPLRRVL VKKTTKADNR 250
PASQRSAKSN DGGPNTVCGI TISNPDKKLW PANTGAAVSK LDLAHYLEAV 300
GPWMLEHIKG RPCSVIRAPD GIDGETFFQR HAMRGMSSEI DLVRISGDRE 350
PYIEVNSVEA LVALGQIAAL EFHPWNCEPL EPDVPGRLVF DLDPAPDVPF 400
DRVVDAANEL RERLQAIGLV PFCKTTGGKG LHVVTPLKPR RGDGIGWNEA 450
KTFAGALCQQ MAADDPKSYL IKMTKKLRTG RIFLDYLRND RMATAVAPLS 500
PRARPGATVS MPLTWSQVRK GLDPARFTVH TVPDLLAKSK AWNDYCDSCR 550
PLGAAIKSLL GK 562
Length:562
Mass (Da):62,167
Last modified:October 5, 2010 - v1
Checksum:iD2AC0EA6014CC288
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002083 Genomic DNA. Translation: ADJ22884.1.
RefSeqiWP_013215099.1. NC_014313.1.
YP_003755205.1. NC_014313.1.

Genome annotation databases

EnsemblBacteriaiADJ22884; ADJ22884; Hden_1070.
GeneIDi9386958.
KEGGihdn:Hden_1070.
PATRICi42370753. VBIHypDen91677_1117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002083 Genomic DNA. Translation: ADJ22884.1 .
RefSeqi WP_013215099.1. NC_014313.1.
YP_003755205.1. NC_014313.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ22884 ; ADJ22884 ; Hden_1070 .
GeneIDi 9386958.
KEGGi hdn:Hden_1070.
PATRICi 42370753. VBIHypDen91677_1117.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi FDDTRAW.

Enzyme and pathway databases

BioCyci HDEN582899:GIWL-1085-MONOMER.

Family and domain databases

InterProi IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF13298. LigD_N. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415.

Entry informationi

Entry nameiD8JV68_HYPDA
AccessioniPrimary (citable) accession number: D8JV68
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: September 3, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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