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Protein

Alanine racemase

Gene

AOLE_06280

Organism
Acinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei34 – 341Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei132 – 1321SubstrateUniRule annotation
Active sitei254 – 2541Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei302 – 3021Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciAOLE436717:GHCD-1295-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:AOLE_06280Imported
OrganismiAcinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1)Imported
Taxonomic identifieri436717 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeAcinetobacter
ProteomesiUP000000392: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei34 – 341N6-(pyridoxal phosphate)lysineUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD8JGJ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000031446.
KOiK01775.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.

Sequencei

Sequence statusi: Complete.

D8JGJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRQATVYIDR NALQYNLNRV KQLAANSKIV SMVKANGYGH GIKDCLAALN
60 70 80 90 100
ASDAFGVACL QEGLEIRELG FQQSVTLIEG VFSEDEMPIA IEQKFECVIH
110 120 130 140 150
HQQQFEWLIK YKQKYIAQGL KVWVKLNSGM NRLGFKVTEI IEVIKTLKAE
160 170 180 190 200
GFTCVLAMHF ANADVDHPLN EQQKQQFLQV KQACEPVLAS CCNSAAIYKW
210 220 230 240 250
PELHFDYVRP GIMLYGASPF ADKTVHDLDL KPVMTFSAEV IALNHIQTNE
260 270 280 290 300
HVGYGSTFCA KQAMDIAIVS IGYGDGYPRA YIKQNYVAID KQLCAVVGRV
310 320 330 340 350
SMDMLAIDVT GMQVKLGTPV ELWGAHRLVD DVADANGTIG YELLCRLSNR

PTRKSS
Length:356
Mass (Da):39,688
Last modified:October 5, 2010 - v1
Checksum:i485297CDE784976D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002080 Genomic DNA. Translation: ADI90149.1.
RefSeqiYP_003731522.1. NC_014259.1.

Genome annotation databases

EnsemblBacteriaiADI90149; ADI90149; AOLE_06280.
GeneIDi9381682.
KEGGiacd:AOLE_06280.
PATRICi42141562. VBIAciSp20010_1253.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002080 Genomic DNA. Translation: ADI90149.1.
RefSeqiYP_003731522.1. NC_014259.1.

3D structure databases

ProteinModelPortaliD8JGJ5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI90149; ADI90149; AOLE_06280.
GeneIDi9381682.
KEGGiacd:AOLE_06280.
PATRICi42141562. VBIAciSp20010_1253.

Phylogenomic databases

HOGENOMiHOG000031446.
KOiK01775.

Enzyme and pathway databases

UniPathwayiUPA00042; UER00497.
BioCyciAOLE436717:GHCD-1295-MONOMER.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the diesel-degrading Acinetobacter sp. strain DR1."
    Jung J., Baek J.H., Park W.
    J. Bacteriol. 192:4794-4795(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 1667 / KCTC 23045 / DR1Imported.

Entry informationi

Entry nameiD8JGJ5_ACISD
AccessioniPrimary (citable) accession number: D8JGJ5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 4, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.