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D8J1R1 (D8J1R1_HERSS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL ADJ62682.1
Ordered Locus Names:Hsero_1165 EMBL ADJ62682.1
OrganismHerbaspirillum seropedicae (strain SmR1) [Complete proteome] [HAMAP] EMBL ADJ62682.1
Taxonomic identifier757424 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeHerbaspirillum

Protein attributes

Sequence length192 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL ADJ62682.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8J1R1 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 7D073F250C0EE625

FASTA19221,380
        10         20         30         40         50         60 
MAHTLPALPY DLDALAPTIS KETLEYHYGK HHQTYVTNLN NLIPGTEFEN LSLEEIIKKS 

        70         80         90        100        110        120 
SGGIFNNAAQ VWNHTFYWNG LTPKGQGAPS GALADAINAK WGSFDAFKAE FTKQGLANFG 

       130        140        150        160        170        180 
SGWTWLVKKA DGTLDIVNTT GAGTPLTTDS KPLLTVDVWE HAYYIDYRNA RAKYVENYWG 

       190 
IINWDFVAKN FA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002039 Genomic DNA. Translation: ADJ62682.1.
RefSeqYP_003774590.1. NC_014323.1.

3D structure databases

ProteinModelPortalD8J1R1.
SMRD8J1R1. Positions 5-192.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ62682; ADJ62682; Hsero_1165.
GeneID9401766.
KEGGhse:Hsero_1165.
PATRIC42361023. VBIHerSer153339_1178.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013584.
KOK04564.

Enzyme and pathway databases

BioCycHSER757424:GCTT-1165-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8J1R1_HERSS
AccessionPrimary (citable) accession number: D8J1R1
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)