Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

D8IXC5

- D8IXC5_HERSS

UniProt

D8IXC5 - D8IXC5_HERSS

Protein
Submitted name:

3-deoxy-d-manno-octulosonic-acid (KDO) transferase protein

Gene

kdtA

Organism
Herbaspirillum seropedicae (strain SmR1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. transferase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    TransferaseImported

    Enzyme and pathway databases

    BioCyciHSER757424:GCTT-475-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    3-deoxy-d-manno-octulosonic-acid (KDO) transferase proteinImported
    Gene namesi
    Name:kdtAImported
    Ordered Locus Names:Hsero_0475Imported
    OrganismiHerbaspirillum seropedicae (strain SmR1)Imported
    Taxonomic identifieri757424 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeHerbaspirillum
    ProteomesiUP000000329: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD8IXC5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000257156.
    KOiK02527.

    Family and domain databases

    InterProiIPR001296. Glyco_trans_1.
    IPR007507. Glycos_transf_N.
    [Graphical view]
    PfamiPF00534. Glycos_transf_1. 1 hit.
    PF04413. Glycos_transf_N. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8IXC5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRWLYSALWW FAMPLVLLRL WRRGRQEPGY RAHVAERLGF YPRLPDPQAR    50
    FIWVHAVSVG ETRAAEPLVD ALLSRYPDCK ILLTCMTATG RATGAQVFGK 100
    HGARVVQSFL PYDTGWMCSR FLRHFRPLAC ILMETEVWPN LIRQCRRHDV 150
    PVMLANARLS ERSLRRGQRF ASLLRPAAEA IDVVGAQSDG DARRLLAFGA 200
    RHVEVTGSLK FDVQPPMQVV ERGREWKRAL GERKVLLCAS TREGEEVLIL 250
    DALAKLGRPD WLTVIVPRHP QRFDEVAALI RARGLRLRRR SELAQDFAVE 300
    DVDVVLGDSM GEMFAYYALS DVSFIGGSLL PLGGQNLIEA LALGKPVLIG 350
    EHTFNFLRIT EEAVADGAAV RVGDAVELLR QWSILIAEPD RIDEMAQAAL 400
    SFAQRHQGAT DRSLVLLAPL LERAHARR 428
    Length:428
    Mass (Da):48,176
    Last modified:October 5, 2010 - v1
    Checksum:i64F0EB876B8FB694
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002039 Genomic DNA. Translation: ADJ62000.1.
    RefSeqiWP_013232518.1. NC_014323.1.
    YP_003773908.1. NC_014323.1.

    Genome annotation databases

    EnsemblBacteriaiADJ62000; ADJ62000; Hsero_0475.
    GeneIDi9401076.
    KEGGihse:Hsero_0475.
    PATRICi42359623. VBIHerSer153339_0485.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002039 Genomic DNA. Translation: ADJ62000.1 .
    RefSeqi WP_013232518.1. NC_014323.1.
    YP_003773908.1. NC_014323.1.

    3D structure databases

    ProteinModelPortali D8IXC5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADJ62000 ; ADJ62000 ; Hsero_0475 .
    GeneIDi 9401076.
    KEGGi hse:Hsero_0475.
    PATRICi 42359623. VBIHerSer153339_0485.

    Phylogenomic databases

    HOGENOMi HOG000257156.
    KOi K02527.

    Enzyme and pathway databases

    BioCyci HSER757424:GCTT-475-MONOMER.

    Family and domain databases

    InterProi IPR001296. Glyco_trans_1.
    IPR007507. Glycos_transf_N.
    [Graphical view ]
    Pfami PF00534. Glycos_transf_1. 1 hit.
    PF04413. Glycos_transf_N. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Herbaspirillum seropedicae SmR1, an endophytic, nitrogen-fixing, plant-growth promoting beta-Proteobacteria."
      Pedrosa F.O., Monteiro R.A., Wassem R., Cruz L.M., Ayub R.A., Colauto N.B., Fernandez M.A., Fungaro M.H.P., Grisard E.C., Hungria M., Madeira H.M.F., Nodari R.O., Osaku C.A., Petzl-Erler M.L., Terenzi H., Vieira L.G.E., Almeida M.I.M., Alves L.R.
      , Arantes O.M.N., Balsanelli E., Barcellos F.G., Baura V.A., Binde D.R., Campo R.J., Chubatsu L.S., Chueire L.M.O., Ciferri R.R., Correa L.C., da Conceicao Silva J.L., Dabul A.N.G., Dambros B.P., Faoro H., Favetti A., Friedermann G., Furlaneto M.C., Gasques L.S., Gimenes C.C.T., Gioppo N.M.R., Glienke-Blanco C., Godoy L.P., Guerra M.P., Karp S., Kava-Cordeiro V., Margarido V.P., Mathioni S.M., Menck-Soares M.A., Murace N.K., Nicolas M.F., Oliveira C.E.C., Pagnan N.A.B., Pamphile J.A., Patussi E.V., Pereira L.F.P., Pereira-Ferrari L., Pinto F.G.S., Precoma C., Prioli A.J., Prioli S.M.A.P., Raittz R.T., Ramos H.J.O., Ribeiro E.M.S.F., Rigo L.U., Rocha C.L.M.S.C., Rocha S.N., Santos K., Satori D., Silva A.G., Simao R.C.G., Soares M.A.M., Souza E.M., Steffens M.B.R., Steindel M., Tadra-Sfeir M.Z., Takahashi E.K., Torres R.A., Valle J.S., Vernal J.I., Vilas-Boas L.A., Watanabe M.A.E., Weiss V.A., Yates M.A., Souza E.M.
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SmR1Imported.

    Entry informationi

    Entry nameiD8IXC5_HERSS
    AccessioniPrimary (citable) accession number: D8IXC5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3