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Protein
Submitted name:

3-deoxy-d-manno-octulosonic-acid (KDO) transferase protein

Gene

kdtA

Organism
Herbaspirillum seropedicae (strain SmR1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionTransferaseImported

Enzyme and pathway databases

BioCyciHSER757424:G1GLZ-477-MONOMER

Protein family/group databases

CAZyiGT30 Glycosyltransferase Family 30

Names & Taxonomyi

Protein namesi
Submitted name:
3-deoxy-d-manno-octulosonic-acid (KDO) transferase proteinImported
Gene namesi
Name:kdtAImported
Ordered Locus Names:Hsero_0475Imported
OrganismiHerbaspirillum seropedicae (strain SmR1)Imported
Taxonomic identifieri757424 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeHerbaspirillum
Proteomesi
  • UP000000329 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi757424.Hsero_0475

Structurei

3D structure databases

ProteinModelPortaliD8IXC5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 212Glycos_transf_NInterPro annotationAdd BLAST180

Phylogenomic databases

eggNOGiENOG4105D8A Bacteria
COG1519 LUCA
HOGENOMiHOG000257156
KOiK02527
OMAiFIKYEFW
OrthoDBiPOG091H01YQ

Family and domain databases

Gene3Di3.40.50.11720, 1 hit
InterProiView protein in InterPro
IPR007507 Glycos_transf_N
IPR038107 Glycos_transf_N_sf
PfamiView protein in Pfam
PF04413 Glycos_transf_N, 1 hit

Sequencei

Sequence statusi: Complete.

D8IXC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWLYSALWW FAMPLVLLRL WRRGRQEPGY RAHVAERLGF YPRLPDPQAR
60 70 80 90 100
FIWVHAVSVG ETRAAEPLVD ALLSRYPDCK ILLTCMTATG RATGAQVFGK
110 120 130 140 150
HGARVVQSFL PYDTGWMCSR FLRHFRPLAC ILMETEVWPN LIRQCRRHDV
160 170 180 190 200
PVMLANARLS ERSLRRGQRF ASLLRPAAEA IDVVGAQSDG DARRLLAFGA
210 220 230 240 250
RHVEVTGSLK FDVQPPMQVV ERGREWKRAL GERKVLLCAS TREGEEVLIL
260 270 280 290 300
DALAKLGRPD WLTVIVPRHP QRFDEVAALI RARGLRLRRR SELAQDFAVE
310 320 330 340 350
DVDVVLGDSM GEMFAYYALS DVSFIGGSLL PLGGQNLIEA LALGKPVLIG
360 370 380 390 400
EHTFNFLRIT EEAVADGAAV RVGDAVELLR QWSILIAEPD RIDEMAQAAL
410 420
SFAQRHQGAT DRSLVLLAPL LERAHARR
Length:428
Mass (Da):48,176
Last modified:October 5, 2010 - v1
Checksum:i64F0EB876B8FB694
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002039 Genomic DNA Translation: ADJ62000.1
RefSeqiWP_013232518.1, NC_014323.1

Genome annotation databases

EnsemblBacteriaiADJ62000; ADJ62000; Hsero_0475
GeneIDi29390013
KEGGihse:Hsero_0475

Similar proteinsi

Entry informationi

Entry nameiD8IXC5_HERSS
AccessioniPrimary (citable) accession number: D8IXC5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 28, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health