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D8IV86

- D8IV86_HERSS

UniProt

D8IV86 - D8IV86_HERSS

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Protein
Submitted name:

Trehalose synthase protein

Gene
Hsero_2326
Organism
Herbaspirillum seropedicae (strain SmR1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHSER757424:GCTT-2326-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Trehalose synthase proteinImported
Gene namesi
Ordered Locus Names:Hsero_2326Imported
OrganismiHerbaspirillum seropedicae (strain SmR1)Imported
Taxonomic identifieri757424 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeHerbaspirillum
ProteomesiUP000000329: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD8IV86.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000268420.
KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

D8IV86-1 [UniParc]FASTAAdd to Basket

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MENIQESGAA YQGDPLAQQP GSSNAYARNA KSGNRKRPRQ AKQSRPGMQF     50
TRDPLWYKDA VIYQIHVKSY FDANDDGIGD FAGLIQKLDY ITGLGVNTIW 100
LLPFYPSPRR DDGYDISEYK NVHPDYGNMS DVRRFIAAAH EHGLRVITEL 150
VINHTSDQHP WFQRARRARP GSVARNFYVW SDDDKSYADT RIIFVDTEKS 200
NWTWDPVAKA YFWHRFYSHQ PDLNFDNPHV LKAVLNVMSF WLDLGIDGLR 250
LDAVPYLIER EGTSNENLPE THAILKRIRA EMDSKYPDRM LLAEANMWPE 300
DVQQYFGDSD ECHMAFHFPL MPRMYMALAS QDRFPITDIL RQTPDIPADC 350
QWAIFLRNHD ELTLEMVTDA ERDYLWNHYA PDRRARINLG IRRRLAPLVE 400
RDWRRIQLLN SFLLSMPGTP VIYYGDEIGM GDNIHLGDRD GVRTPMQWTP 450
DRNGGFSRVD PARLVLPLLM DPQYGYQTIN VEAQSADRHS MLNWMRRLLN 500
VRKQHQAFGR GSLALVYPSN RKIFAYLREF TDPRPGGATE TILCVANVSQ 550
SAQAVELDLS AFAGRIPIEM MGGAAFPPIG QLNYLLTLPP FGFYWFLLAP 600
EANMPSWRAP TPEPLPEYVT LVLRKGVQEI MEPPARKLLE QEVLPHYLLK 650
RRWYAGKQRQ IDKVEMREAT TLPMSRTRPG ALPIVLTEID VHSSGTEGDA 700
GAGSVQRYLL PLGFIREEDT VSALPHQLAL SRVRRGRNVG FLTDAFALDS 750
FIVAVLELLA DSASIKTRSG QLRCIPTAAF DPAILTTALE LRRITQEQSN 800
SSVVINNVMM MKVLRQVNPG IHPEIEMGRY LTERGFANVA ATLGEVVRVA 850
DDGTPYALIV LQRYVDNQGD AWQWSMDTLE RAIQSEALDE SQRQPNTRPQ 900
DAQGIDDNSA LVELVTFSRL LGQRLGEMHS LLGQPSDDPA FDPQTIGEPV 950
WRSWAQGAAQ QLEAALDILR QKEEWPDAAE AHHAARLLAQ RERLLERIHP 1000
LAQAAEGSLA MRLHGDLHLG QVLIAFNDVY IVDFEGEPAR PLEQRRAKGS 1050
PLRDVAGLLR SFDYAAAFGH TMGPTDLDEA ALASKKQILQ RFAPACQAAL 1100
LEGYRLGNPL LEQSLPLDAQ ALLLDLFTLE KAAYEICYEA ANRPTWMHVP 1150
LRGLYLIANR ILGEEDGA 1168
Length:1,168
Mass (Da):132,227
Last modified:October 5, 2010 - v1
Checksum:i893525A8DE8F57C2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002039 Genomic DNA. Translation: ADJ63825.1.
RefSeqiYP_003775733.1. NC_014323.1.

Genome annotation databases

EnsemblBacteriaiADJ63825; ADJ63825; Hsero_2326.
GeneIDi9402927.
KEGGihse:Hsero_2326.
PATRICi42363425. VBIHerSer153339_2361.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002039 Genomic DNA. Translation: ADJ63825.1 .
RefSeqi YP_003775733.1. NC_014323.1.

3D structure databases

ProteinModelPortali D8IV86.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ63825 ; ADJ63825 ; Hsero_2326 .
GeneIDi 9402927.
KEGGi hse:Hsero_2326.
PATRICi 42363425. VBIHerSer153339_2361.

Phylogenomic databases

HOGENOMi HOG000268420.
KOi K05343.

Enzyme and pathway databases

BioCyci HSER757424:GCTT-2326-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of Herbaspirillum seropedicae SmR1, an endophytic, nitrogen-fixing, plant-growth promoting beta-Proteobacteria."
    Pedrosa F.O., Monteiro R.A., Wassem R., Cruz L.M., Ayub R.A., Colauto N.B., Fernandez M.A., Fungaro M.H.P., Grisard E.C., Hungria M., Madeira H.M.F., Nodari R.O., Osaku C.A., Petzl-Erler M.L., Terenzi H., Vieira L.G.E., Almeida M.I.M., Alves L.R.
    , Arantes O.M.N., Balsanelli E., Barcellos F.G., Baura V.A., Binde D.R., Campo R.J., Chubatsu L.S., Chueire L.M.O., Ciferri R.R., Correa L.C., da Conceicao Silva J.L., Dabul A.N.G., Dambros B.P., Faoro H., Favetti A., Friedermann G., Furlaneto M.C., Gasques L.S., Gimenes C.C.T., Gioppo N.M.R., Glienke-Blanco C., Godoy L.P., Guerra M.P., Karp S., Kava-Cordeiro V., Margarido V.P., Mathioni S.M., Menck-Soares M.A., Murace N.K., Nicolas M.F., Oliveira C.E.C., Pagnan N.A.B., Pamphile J.A., Patussi E.V., Pereira L.F.P., Pereira-Ferrari L., Pinto F.G.S., Precoma C., Prioli A.J., Prioli S.M.A.P., Raittz R.T., Ramos H.J.O., Ribeiro E.M.S.F., Rigo L.U., Rocha C.L.M.S.C., Rocha S.N., Santos K., Satori D., Silva A.G., Simao R.C.G., Soares M.A.M., Souza E.M., Steffens M.B.R., Steindel M., Tadra-Sfeir M.Z., Takahashi E.K., Torres R.A., Valle J.S., Vernal J.I., Vilas-Boas L.A., Watanabe M.A.E., Weiss V.A., Yates M.A., Souza E.M.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SmR1Imported.

Entry informationi

Entry nameiD8IV86_HERSS
AccessioniPrimary (citable) accession number: D8IV86
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 13, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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