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Protein
Submitted name:

Trehalose synthase protein

Gene

Hsero_2326

Organism
Herbaspirillum seropedicae (strain SmR1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciHSER757424:GCTT-2326-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Trehalose synthase proteinImported
Gene namesi
Ordered Locus Names:Hsero_2326Imported
OrganismiHerbaspirillum seropedicae (strain SmR1)Imported
Taxonomic identifieri757424 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesOxalobacteraceaeHerbaspirillum
ProteomesiUP000000329 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi757424.Hsero_2326.

Structurei

3D structure databases

ProteinModelPortaliD8IV86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000268420.
KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

D8IV86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENIQESGAA YQGDPLAQQP GSSNAYARNA KSGNRKRPRQ AKQSRPGMQF
60 70 80 90 100
TRDPLWYKDA VIYQIHVKSY FDANDDGIGD FAGLIQKLDY ITGLGVNTIW
110 120 130 140 150
LLPFYPSPRR DDGYDISEYK NVHPDYGNMS DVRRFIAAAH EHGLRVITEL
160 170 180 190 200
VINHTSDQHP WFQRARRARP GSVARNFYVW SDDDKSYADT RIIFVDTEKS
210 220 230 240 250
NWTWDPVAKA YFWHRFYSHQ PDLNFDNPHV LKAVLNVMSF WLDLGIDGLR
260 270 280 290 300
LDAVPYLIER EGTSNENLPE THAILKRIRA EMDSKYPDRM LLAEANMWPE
310 320 330 340 350
DVQQYFGDSD ECHMAFHFPL MPRMYMALAS QDRFPITDIL RQTPDIPADC
360 370 380 390 400
QWAIFLRNHD ELTLEMVTDA ERDYLWNHYA PDRRARINLG IRRRLAPLVE
410 420 430 440 450
RDWRRIQLLN SFLLSMPGTP VIYYGDEIGM GDNIHLGDRD GVRTPMQWTP
460 470 480 490 500
DRNGGFSRVD PARLVLPLLM DPQYGYQTIN VEAQSADRHS MLNWMRRLLN
510 520 530 540 550
VRKQHQAFGR GSLALVYPSN RKIFAYLREF TDPRPGGATE TILCVANVSQ
560 570 580 590 600
SAQAVELDLS AFAGRIPIEM MGGAAFPPIG QLNYLLTLPP FGFYWFLLAP
610 620 630 640 650
EANMPSWRAP TPEPLPEYVT LVLRKGVQEI MEPPARKLLE QEVLPHYLLK
660 670 680 690 700
RRWYAGKQRQ IDKVEMREAT TLPMSRTRPG ALPIVLTEID VHSSGTEGDA
710 720 730 740 750
GAGSVQRYLL PLGFIREEDT VSALPHQLAL SRVRRGRNVG FLTDAFALDS
760 770 780 790 800
FIVAVLELLA DSASIKTRSG QLRCIPTAAF DPAILTTALE LRRITQEQSN
810 820 830 840 850
SSVVINNVMM MKVLRQVNPG IHPEIEMGRY LTERGFANVA ATLGEVVRVA
860 870 880 890 900
DDGTPYALIV LQRYVDNQGD AWQWSMDTLE RAIQSEALDE SQRQPNTRPQ
910 920 930 940 950
DAQGIDDNSA LVELVTFSRL LGQRLGEMHS LLGQPSDDPA FDPQTIGEPV
960 970 980 990 1000
WRSWAQGAAQ QLEAALDILR QKEEWPDAAE AHHAARLLAQ RERLLERIHP
1010 1020 1030 1040 1050
LAQAAEGSLA MRLHGDLHLG QVLIAFNDVY IVDFEGEPAR PLEQRRAKGS
1060 1070 1080 1090 1100
PLRDVAGLLR SFDYAAAFGH TMGPTDLDEA ALASKKQILQ RFAPACQAAL
1110 1120 1130 1140 1150
LEGYRLGNPL LEQSLPLDAQ ALLLDLFTLE KAAYEICYEA ANRPTWMHVP
1160
LRGLYLIANR ILGEEDGA
Length:1,168
Mass (Da):132,227
Last modified:October 5, 2010 - v1
Checksum:i893525A8DE8F57C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002039 Genomic DNA. Translation: ADJ63825.1.

Genome annotation databases

EnsemblBacteriaiADJ63825; ADJ63825; Hsero_2326.
KEGGihse:Hsero_2326.
PATRICi42363425. VBIHerSer153339_2361.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002039 Genomic DNA. Translation: ADJ63825.1.

3D structure databases

ProteinModelPortaliD8IV86.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi757424.Hsero_2326.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADJ63825; ADJ63825; Hsero_2326.
KEGGihse:Hsero_2326.
PATRICi42363425. VBIHerSer153339_2361.

Phylogenomic databases

HOGENOMiHOG000268420.
KOiK05343.

Enzyme and pathway databases

BioCyciHSER757424:GCTT-2326-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Herbaspirillum seropedicae SmR1, an endophytic, nitrogen-fixing, plant-growth promoting beta-Proteobacteria."
    Pedrosa F.O., Monteiro R.A., Wassem R., Cruz L.M., Ayub R.A., Colauto N.B., Fernandez M.A., Fungaro M.H.P., Grisard E.C., Hungria M., Madeira H.M.F., Nodari R.O., Osaku C.A., Petzl-Erler M.L., Terenzi H., Vieira L.G.E., Almeida M.I.M., Alves L.R.
    , Arantes O.M.N., Balsanelli E., Barcellos F.G., Baura V.A., Binde D.R., Campo R.J., Chubatsu L.S., Chueire L.M.O., Ciferri R.R., Correa L.C., da Conceicao Silva J.L., Dabul A.N.G., Dambros B.P., Faoro H., Favetti A., Friedermann G., Furlaneto M.C., Gasques L.S., Gimenes C.C.T., Gioppo N.M.R., Glienke-Blanco C., Godoy L.P., Guerra M.P., Karp S., Kava-Cordeiro V., Margarido V.P., Mathioni S.M., Menck-Soares M.A., Murace N.K., Nicolas M.F., Oliveira C.E.C., Pagnan N.A.B., Pamphile J.A., Patussi E.V., Pereira L.F.P., Pereira-Ferrari L., Pinto F.G.S., Precoma C., Prioli A.J., Prioli S.M.A.P., Raittz R.T., Ramos H.J.O., Ribeiro E.M.S.F., Rigo L.U., Rocha C.L.M.S.C., Rocha S.N., Santos K., Satori D., Silva A.G., Simao R.C.G., Soares M.A.M., Souza E.M., Steffens M.B.R., Steindel M., Tadra-Sfeir M.Z., Takahashi E.K., Torres R.A., Valle J.S., Vernal J.I., Vilas-Boas L.A., Watanabe M.A.E., Weiss V.A., Yates M.A., Souza E.M.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SmR1Imported.

Entry informationi

Entry nameiD8IV86_HERSS
AccessioniPrimary (citable) accession number: D8IV86
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 22, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.