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D8IKK4 (D8IKK4_LACSC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding85 – 884ATP By similarity HAMAP-Rule MF_00124

Sites

Active site861Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1431Zinc By similarity HAMAP-Rule MF_00124
Metal binding1461Zinc By similarity HAMAP-Rule MF_00124
Metal binding1801Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D8IKK4 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: BE63E1DEECCD6182

FASTA20123,011
        10         20         30         40         50         60 
MAQLFFRYGA MNSGKTIEIL KVAHNYEEQG KNVIIMTSGL DNRDGYGYVS SRIGLKRKAI 

        70         80         90        100        110        120 
PVVSETNIKD LVEQSSLEPA CILVDEAQFL EKHHVLELTQ IVDELNIPVM TFGLKNDFMN 

       130        140        150        160        170        180 
ELFEGSKYLL LYADKIEEMK TICWFCNKKA IMNLRMHDSK PVYSGEQIMI GGNESYYPVC 

       190        200 
RKHYFNPPIN NLEKDEGEIN G 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Lactobacillus salivarius CECT 5713, a probiotic strain isolated from human milk and infant feces."
Jimenez E., Martin R., Maldonado A., Martin V., Gomez de Segura A., Fernandez L., Rodriguez J.M.
J. Bacteriol. 192:5266-5267(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CECT 5713 EMBL ADJ78806.1.
[2]"Complete Genome Sequence of Lactobacillus salivarius CECT 5713, a probiotic strain isolated from human milk and infant feces."
Jimenez E., Martin R., Maldonado A., Martin V., Fernandez L., Rodriguez J.M.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CECT 5713.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002034 Genomic DNA. Translation: ADJ78806.1.
RefSeqYP_005863593.1. NC_017481.1.

3D structure databases

ProteinModelPortalD8IKK4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ78806; ADJ78806; HN6_00526.
GeneID12472126.
KEGGlsi:HN6_00526.
PATRIC43090140. VBILacSal150030_0306.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.
OMARTICHCG.

Enzyme and pathway databases

BioCycLSAL712961:GLFC-524-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8IKK4_LACSC
AccessionPrimary (citable) accession number: D8IKK4
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)