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D8ICZ6 (D8ICZ6_BRAP9) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:BP951000_1028 EMBL ADK31019.1
OrganismBrachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000) [Complete proteome] [HAMAP] EMBL ADK31019.1
Taxonomic identifier759914 [NCBI]
Taxonomic lineageBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding88 – 925GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding143 – 1464GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
D8ICZ6 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: D615C1A8D89D08FF

FASTA40844,512
        10         20         30         40         50         60 
MAKGTYEGTK THVNVGTIGH VDHGKTTLTS AITAVSSAMF PATVQKVAYD SVAKASESQG 

        70         80         90        100        110        120 
RRDPTKILTI ATSHVEYESD NRHYAHVDCP GHADYIKNMI TGAAQMDGAI LVVSAEDGVM 

       130        140        150        160        170        180 
PQTKEHVLLS RQVGVNYIVV FLNKCDKLDD PEMAEIVEAE VVDVLDHYGF DGSKTPIIRG 

       190        200        210        220        230        240 
SAIKAIQAIE AGKDPRTDPD CKCILDLLNA LDTYIPDPVR ETDKDFLMSI EDVYSIPGRG 

       250        260        270        280        290        300 
TVVTGRIERG QIKKGDEVEI VGLRETKKTT CTGVEMFKKE VVGIAGYNVG CLLRGIERKE 

       310        320        330        340        350        360 
VERGQVLAKP GTITPHKKFE AEVYILKKEE GGRHSGFVSG YRPQMYFRTT DVTGVINLPE 

       370        380        390        400 
GSPMIMPGDN ANLTIELISQ IAMEEKQRFA IREGGKTVGN GVVTKILE 

« Hide

References

[1]"The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes."
Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B., Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J.
PLoS ONE 5:E11455-E11455(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1826 / 95/1000.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002025 Genomic DNA. Translation: ADK31019.1.
RefSeqYP_003785520.1. NC_014330.1.

3D structure databases

ProteinModelPortalD8ICZ6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADK31019; ADK31019; BP951000_1028.
GeneID9451147.
KEGGbpo:BP951000_1028.
PATRIC42196487. VBIBraPil164347_1006.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.

Enzyme and pathway databases

BioCycBPIL759914:GHZ5-1027-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8ICZ6_BRAP9
AccessionPrimary (citable) accession number: D8ICZ6
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)