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D8IA88

- D8IA88_BRAP9

UniProt

D8IA88 - D8IA88_BRAP9

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Protein
Submitted name:

DNA-directed RNA polymerase, omega subunit family protein-like protein

Gene

BP951000_2245

Organism
Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA-directed RNA polymerase activity Source: UniProtKB-KW
  2. lipid binding Source: InterPro

GO - Biological processi

  1. lipid transport Source: InterPro
  2. lipoprotein metabolic process Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription

Enzyme and pathway databases

BioCyciBPIL759914:GHZ5-2242-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase, omega subunit family protein-like proteinImported
Gene namesi
Ordered Locus Names:BP951000_2245Imported
OrganismiBrachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)Imported
Taxonomic identifieri759914 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira
ProteomesiUP000000332: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000096448.

Family and domain databases

InterProiIPR000074. ApoA1_A4_E.
[Graphical view]
PfamiPF01442. Apolipoprotein. 22 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8IA88-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MLIIPIIVVG ISKIIDRKKN NNNSNYDDIF AEEKAALEGI IEEKISEVRD
60 70 80 90 100
NAIDLEIAVK KAGFISKSME EDLAKLNNKI ESYKDYKAAV SQYQEQVDSL
110 120 130 140 150
EEAYLDILNK VDTVLKERNT IEKTYKRISD VKTKMIELEK NVSSIQDNLI
160 170 180 190 200
ASYNAKLNDF ESELYKRFDA LTTNLLARDA HYTDMAEQEK DKISALTEEF
210 220 230 240 250
KLHVAKKEEL FTNQLTQLAE RTARNNIEQL AELFEKGRDE LINKYSLFAE
260 270 280 290 300
EINSKSKDIE ERYASLSQSK EGLEVELINL RDTIQERLNS ITESSVEEFK
310 320 330 340 350
GEMEKTKEFL YNTLKEELEK IGNEKEEFLE SVEDKAHSLE KTIDDIKDKA
360 370 380 390 400
ELITKDYEDK TVQLETEFTT LKNDISNRLI TEVEAFSNNI RNILENENDG
410 420 430 440 450
VITLYRNKTK ELSDLIVSID GMSEETMLRA ESKFDEIVND IERLKNDILA
460 470 480 490 500
RTQDDMEYSI DNARSSLIAE INELRADVET ETNILKDKMN EIHYQTSEIS
510 520 530 540 550
SILTNKQEEI LDALSLEKEY LYKDLEEQAN KKIQELEDNF NNIKSDFEIG
560 570 580 590 600
VDNYIKNTYT DLNNVTEKLS VLKEQYDNDS NKIQDLLKDT EINLKENIEK
610 620 630 640 650
RIELLDKTSS EIKDLVDSAN EKLDTGIKNA ESNIEEIRNN LYEYGNSYLD
660 670 680 690 700
SLKSQLKEVL DNYEETSMKS ISDSINSLVH QVEESDKRHN DIVSNMEDSL
710 720 730 740 750
KEFKDKIDYS LNENKEFAED NKNKIVNMLN TELLEATNSF DALLNEKREG
760 770 780 790 800
INKVRDDIED ILNKVENGRE DFENTINRVY DVANEKESNL LSNIEDKYKS
810 820 830 840 850
LNDKIDDLFS ESKSDLDSMT KEYKGSLENY YNNLRNEYEQ LKEHSDIISD
860 870 880 890 900
EYRIKMDTLS SKLEELAFAS KNMEDSIENK TKDITDYVNS VKENVDAKSN
910 920 930 940 950
EVVSSVNSII EDIETKKENI NKYVDELKSN IDDKLDITDS YVNELRENID
960 970 980 990 1000
NIEKNSDEYL SALKDVVDDR LETVDSYVNE FKSNIDSKEK DSNYYIDALK
1010 1020 1030 1040 1050
NNIDDRLETA DSYVNDLKDN IDSLKKAVNT EMQNVSSYIE ERKEFLNAKC
1060 1070 1080 1090 1100
DEAFNSVEEE ASNKLDELNE IIEAAIEKYN DEIKEIESVR LEENANIIAD
1110 1120 1130 1140 1150
VENIGANIRK DYKKYTKILE EIYNNKKTSL DDYANELKND IEKHREDAEK
1160 1170 1180 1190 1200
IHLENEANYI DDYLKTKSLE IDEKVNNINT TLNDSFNTLY NGVTELLEKA
1210 1220 1230 1240 1250
KEYTDSAVSN QTLELSKALE LLRDGFNSYK DGLDSKLKEE IDNMISNNEN
1260 1270 1280 1290 1300
MLSMFNEYNE KIERINDISN LVDSLKDDIY NELEELKSDV SFKNTEFDRT
1310 1320 1330 1340 1350
IDEIKSSIMS REELNDIQES EREALNVQLD DMKEEFEIFK SQILKSNEVE
1360 1370 1380 1390 1400
IPALLEEERE RIENIFDEFS KNLLMRISDN ESDLSYIKDV LSEERNHLIE
1410 1420 1430 1440 1450
KIELIEKDLE DIKTDNRVDA LVEDKLQLET SLDDLKSDIE KVKNLEKDFI
1460 1470 1480 1490 1500
SLKDRMEGID STIKDDVASL SSKLIDFKDN LEEKISNDSS SLLEDLETLN
1510 1520 1530 1540 1550
KELYDIKGNL SNSIDKTDNI ENRMENILKE LSSGNEEFKN RIEKRIEYFE
1560 1570 1580 1590 1600
DSWSDPTKIR SMYANEIKEE INNLRAYSDE KFDVYINELK SQIDEISSGI
1610 1620 1630 1640 1650
EDWKNENINE LLSQLNDAKN SIESYIKDTD SKKEELLSDI LKKLEAKEGE
1660 1670 1680 1690 1700
IYSRIDEKII DVDNKLSAID KKINDDIGSS LENIYKMIND ASNKYNEEIK
1710 1720 1730 1740 1750
NIEHHRSNEK EAIISDLKSL SDSIRADYEE YSIMLDNAYN TAVSALDEHL
1760 1770 1780 1790 1800
DNVKKEIENI KDESETELLN NEKNYINEYL EEYSNNLDSR LEEKLLVLEE
1810 1820 1830 1840 1850
SKKELDNILN SSFENLNNRI EESLSKVNSL AEEKLISIEK DINDKLLVNV
1860 1870 1880 1890 1900
EKLSKLEEDF GKLFNKDYVE ELDLRINSIN SKLEEEISNI RNSLDNDISS
1910 1920 1930 1940 1950
VRSQYKELSV DFEEALDLVK KSILDRDEVI DLQSKEKDEL ISQLESLRDD
1960 1970 1980 1990 2000
YLSLKGDVSS VSDNNELYSL FEEEREKLER GFEEFSSELL NRLNDTDSDI
2010 2020 2030 2040 2050
NYIKDMLSSD KNLLLEELDA LRLEVENVHN DERLNELLDY KLSLEDSFNG
2060 2070 2080 2090 2100
IREELSKFDE LESSLNELRG SVSELEGSFN NSLEELKDNV GRQLEGYNVN
2110 2120 2130 2140 2150
LNNLNSDINR LSNSVEDITS NNENISTNLD TISSNFEVLN NNFESVNGNV
2160 2170 2180 2190 2200
NDFNNRLSSF KEDIDKAINK SLELENSISN YRKDLEDKLS GITNNINSLS
2210 2220 2230 2240 2250
NDSSVKDLFN EELSKLNNLF DNLEKDNKEF RDRLERRVEY FEDTWSDSSR
2260 2270 2280 2290 2300
IRSLYSAELR EELENIKYER ELEFENYLEE LRAKVDNLSS SVDNYKEGDI
2310 2320 2330 2340 2350
NRLLSELEQA KNGIESYIKD TDSKKEELLS SIMNELELKE KAIHDRLEES
2360 2370 2380 2390 2400
KSNIDSYIKD ADIKKEEFLS SMMNELESKE KAIYDRLEDR VKDIENKLSM
2410 2420 2430 2440 2450
LDNKVSNEVS RDLENFYNSL NEAVNNYKAE INTIEANSAE LSTDAINRIS
2460 2470 2480 2490 2500
EEIKNSYENY VRDLEEVYNN SVSLLEEYSN NLKDELDSLK EENTEADKNY
2510 2520 2530 2540 2550
INEYLEEYSN NLDSRLEEKL LVLEESKKEL DNILNSSFEN LNSRIEESLS
2560 2570 2580 2590 2600
KVNSLAEERI SSLEKDINDK LLANVDKLSK LEEDFGKLFN KDYVEELDSR
2610 2620 2630 2640 2650
INSINSKLEE EISNIRNSLD NDISSVRSQY KELSVDFEEA LDLVKKSILD
2660 2670 2680 2690 2700
RDEVIDLQSK EKDELISQLE SLRDDYLSLK GDVSSVSDNN ELYSLFEEER
2710 2720 2730 2740 2750
EKLERGFEEF SSELLNRLND TDSDINYIKD MLSSDKNLLL EELDALRLEV
2760 2770 2780 2790 2800
ENVHNDERLN ELLDYKLSLE DSFNGIREEL SKFDELESSL NELRDSVSEL
2810 2820 2830 2840 2850
DGSLLSSINA SIDELKKEYN DVHLEIDKLN GSIEELSLNN ENISANLDTI
2860 2870 2880 2890 2900
SSNFEVLNNN FESVNGNVND FDNRLSSFKE DVDKAINKSL ELENSISNYR
2910 2920 2930 2940 2950
KDLEDKLSGI TNNINSLSND SSVKDLFNEE LSKLNDLFDN LEKDNKEFRD
2960 2970 2980 2990 3000
RLERRVEYFE DTWSDSARIR SLYSSDLREE LENIKYEREL EFENYLEELR
3010 3020 3030 3040 3050
AKVDNLSSSV DNYKEGDINR LLSELEQAKN SIESYIKDTD SKKEELLSSI
3060 3070 3080 3090 3100
MNELESKEKA IYDRLEDRVK DIENKLSVFD DKISNEVSRD LENFYNSLNE
3110 3120 3130 3140 3150
AVNNYKAEIN TIEANSAELS ADTLNKISEE VKNSYENYVK DLEEVYNNSV
3160 3170 3180 3190 3200
SLLEEYSNNL KNELDSLKEE NTEADKNYIN EYLEEYSNNL KDELENLKEE
3210 3220 3230 3240 3250
NAESQKNYID EYLQEYLNNI DSKLEDKLDI LNKAKEELDN IIKASFDELN
3260 3270 3280 3290 3300
SNLNDTINKI NENTLNQNER ISIVESKLND YAEQISKLDD KEKLFYEYID
3310 3320 3330 3340 3350
SKISELKEEY EALNKSFEDK FLSIESAVLS DEHVEALREE FANFKDTILE
3360 3370 3380 3390 3400
AKKSDIPSIF EELKSQFEES FDMFTKEIFN RVSDSESMIS NIKNTMEDEK
3410 3420 3430 3440 3450
NTILDKIDNF KFELEALKNN DTLNELEEER IKLEDTFNSL KEDFNKLDEL
3460 3470 3480 3490 3500
ENEVYFLKNN LEGVDGNLRI DVDRLFEEIS EFKYSLEYKI DTLEDNTVSK
3510 3520 3530 3540 3550
EYFDEEKEKL YSLYDELNSS NDEFRDNINN RVAYFEDNLS DPSKILKLYE
3560 3570 3580 3590 3600
DAITPEVNNL KNEIISNLKE QIDEVENGIS IWKDDSLYNL LEQLKEAKNN
3610 3620 3630 3640 3650
IESFIDSTND KKESIVDDIV KAVREKIEDR ENELNESLES RIDSINDKVS
3660 3670 3680 3690 3700
DLESKLTSDI NRFNNIITDA IDKYEDELKN IESYRLEESS SIMKDIDDVG
3710 3720 3730 3740 3750
KNIISNYESY AKLLNTAYEN NSKSLEELCN NLKLEIEKAK LDANRGYIDV
3760 3770 3780 3790 3800
YLNDYSSKID AKLKEQMDSI EKSKESLDNI ITDSLSDLNE NINNTISKAL
3810 3820 3830 3840 3850
ESSESKINDF INSKELELVN KISSYEDNTI SKDELSEELK KIEESFELFK
3860 3870 3880 3890 3900
SNNNDIFSTL EEYKTKISSI VDSLSDIEDN NLNFTSRLEK RIEFFEDSWG
3910 3920 3930 3940 3950
DGDKIKELYS DFIAEKADSF KSDLEVKFRD SFEEFNLKID NVEKNFADSI
3960 3970 3980 3990 4000
NSIIESLDKE NLTSNERLES ISNTINNLKS DLENKIVSIE EANDKSKLFI
4010 4020 4030 4040 4050
DDKLSIFENK MEAFEDRIKD VEDSQHYLNN DITQYVNRLD KVLNDYEEAI
4060 4070 4080 4090 4100
DTKINNLKNS LSNESGHVEH NLISSLELSN ELAKDKKELL DSIHELKKDV
4110 4120 4130 4140 4150
YETIERKDAQ MNEEFSKFKT EIIESIPSME DISDLFVSEK NNIVNEFEGF
4160 4170 4180 4190 4200
KNEILTSNNK NFADMFEEEK NKLIEELDNF KSAIRVEYMS NSDKIDAFKN
4210 4220 4230 4240 4250
EYLKNFNEII DKEKANLYYA LNDIRKEFES LKDNSVPLDK FEELISEYKG
4260 4270 4280 4290 4300
SIDNSIDDTK EKLSSNIADK DYVSKLFDEE IANINKTIEE FRKDLEENYS
4310 4320 4330 4340 4350
PTDVIAEILS KEQVDFENKL SSLKESILKD IPTLEDISNI FVEEKMSLRE
4360 4370 4380 4390 4400
EFASFRDDIE SKISEEGHFE NIEEQYKLDM KNNFAMLQEE VVGNINSYRD
4410 4420 4430 4440 4450
NMVNDISNFR DEFANKLSFI EELANSLLQE RERIALEVED IRLKYETGTL
4460 4470 4480 4490 4500
YSDDAINTIE SDRNKLINEF INFRKTILEL IREQDEAMKV LNNEKMSIID
4510 4520 4530 4540 4550
NIDELNKKVS LDLISKDDAI SLIDEQKKEI LDVLENFKGD SIEADFKYMT
4560 4570 4580 4590 4600
EELRDDIIKV FEESNEAFRK RIEARIEHFE DAYSEPEKIK EFYRDAIDAE
4610 4620 4630 4640 4650
VDNIKESASH ILLDITDNVE KVKKHIDDIE NEKVKSIIER IDNAQSEIDA
4660 4670 4680 4690 4700
IVDTIKVNLK EQENEIRLLS QSQKLISQDI ENVRKEREAL IEMVKTSDVN
4710 4720 4730 4740 4750
INNKIDSLTS AVIEASDNAA ERIAEKELEF NRKIKEVEEY IASMEEKIIN
4760 4770 4780 4790 4800
ENNEHLDKSK EAVNNLLASF NESILKETND LTPHIMKIVN EFVNNEMKKF
4810 4820 4830 4840 4850
ERFNDVKQAI DEVELSINDK IDDTFKLMNS KLDDTAKELR DNMSSYQDEL
4860 4870 4880 4890 4900
LSELRNAVNS ESERSIEEVK AMHEEELTKL KDMYLETEKY YSDRQERSKE
4910 4920 4930 4940 4950
DIVALFENTY KEWQDKINSL YSELESTKES MHSSVDNLLD DLEKAIDAKE
4960 4970 4980 4990 5000
EFNKSLEDNK EKLKDVEEKM NNLQNEFSPS IEKLQAIVEE KALELQNKIE
5010 5020 5030 5040 5050
LYSKDIEEEG NKFKSRLEEL SSNAKTSLDS KVVEFDSIID NVANRINELL
5060 5070 5080 5090 5100
EDKNNQFDEL RTQYEDISIS LLELRESISD AVNEKIKEAN SIIEENITNI
5110 5120 5130 5140 5150
EESANDKYDK YIDRLNSNME QTLSLLMNDA KEYVQNAKEE MLKVQSSNLD
5160 5170 5180 5190 5200
VYDERLAGMK NIISALEDDI AKYSSEIDAR LEDINLKYED KTNVILKDLD
5210 5220 5230 5240 5250
SRTDSLTEKL NDVVNSIDKM LDDKTYDINS EYETLKIQIE KIGKDIDKYM
5260 5270 5280 5290 5300
NTVKVFDKAE EMANFIKDDV AKLDVLVNDT KNTVYDMNKT MSEFEELKNM
5310 5320 5330 5340 5350
HNTILDYAES IRKEKESLKD TQEKVNMLVE MSEEVQNKFI QIAESNSMIE
5360 5370 5380 5390 5400
NTQEGIKVVI DIASQIENKL AIINDKEEQA NTILEKVNIA DNESDDILQR
5410 5420 5430 5440 5450
IDTIKSAMLD IEDTRREFSD KMFALDREMA KIDKNDEKVQ KFFSKLEELN
5460 5470 5480 5490 5500
VIIEEIQNQR ENLKYMKKQY EDYDNNIVKN LERAEYFVRY LETLLDNAEK
5510 5520 5530 5540 5550
YVNDAGKSLT KRSKTATTKI NDKKENIIIN MYKQGWKYDE IVKNTSYDRD
5560
EVERVIKKWK DESARGY
Length:5,567
Mass (Da):648,753
Last modified:October 5, 2010 - v1
Checksum:iA139DA3B591C6DE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002025 Genomic DNA. Translation: ADK32218.1.
RefSeqiWP_013245167.1. NC_014330.1.
YP_003786719.1. NC_014330.1.

Genome annotation databases

EnsemblBacteriaiADK32218; ADK32218; BP951000_2245.
GeneIDi9452362.
KEGGibpo:BP951000_2245.
PATRICi42198925. VBIBraPil164347_2207.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002025 Genomic DNA. Translation: ADK32218.1 .
RefSeqi WP_013245167.1. NC_014330.1.
YP_003786719.1. NC_014330.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADK32218 ; ADK32218 ; BP951000_2245 .
GeneIDi 9452362.
KEGGi bpo:BP951000_2245.
PATRICi 42198925. VBIBraPil164347_2207.

Phylogenomic databases

HOGENOMi HOG000096448.

Enzyme and pathway databases

BioCyci BPIL759914:GHZ5-2242-MONOMER.

Family and domain databases

InterProi IPR000074. ApoA1_A4_E.
[Graphical view ]
Pfami PF01442. Apolipoprotein. 22 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes."
    Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B., Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J.
    PLoS ONE 5:E11455-E11455(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1826 / 95/1000Imported.

Entry informationi

Entry nameiD8IA88_BRAP9
AccessioniPrimary (citable) accession number: D8IA88
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3