D8IA88 (D8IA88_BRAP9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-directed RNA polymerase, omega subunit family protein-like protein EMBL ADK32218.1

Gene names

Ordered Locus Names:

BP951000_2245

Organism

Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000) [Complete proteome] [HAMAP]

Taxonomic identifier

759914 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Brachyspiraceae › Brachyspira › Brachyspira pilosicoli

Protein attributes

Sequence length	5567 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase EMBL ADK32218.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	RNA biosynthetic process Inferred from electronic annotation. Source: GOC lipid transport Inferred from electronic annotation. Source: InterPro lipoprotein metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW lipid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8IA88 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: A139DA3B591C6DE4	FASTA	5,567	648,753
	10 20 30 40 50 60 MLIIPIIVVG ISKIIDRKKN NNNSNYDDIF AEEKAALEGI IEEKISEVRD NAIDLEIAVK 70 80 90 100 110 120 KAGFISKSME EDLAKLNNKI ESYKDYKAAV SQYQEQVDSL EEAYLDILNK VDTVLKERNT 130 140 150 160 170 180 IEKTYKRISD VKTKMIELEK NVSSIQDNLI ASYNAKLNDF ESELYKRFDA LTTNLLARDA 190 200 210 220 230 240 HYTDMAEQEK DKISALTEEF KLHVAKKEEL FTNQLTQLAE RTARNNIEQL AELFEKGRDE 250 260 270 280 290 300 LINKYSLFAE EINSKSKDIE ERYASLSQSK EGLEVELINL RDTIQERLNS ITESSVEEFK 310 320 330 340 350 360 GEMEKTKEFL YNTLKEELEK IGNEKEEFLE SVEDKAHSLE KTIDDIKDKA ELITKDYEDK 370 380 390 400 410 420 TVQLETEFTT LKNDISNRLI TEVEAFSNNI RNILENENDG VITLYRNKTK ELSDLIVSID 430 440 450 460 470 480 GMSEETMLRA ESKFDEIVND IERLKNDILA RTQDDMEYSI DNARSSLIAE INELRADVET 490 500 510 520 530 540 ETNILKDKMN EIHYQTSEIS SILTNKQEEI LDALSLEKEY LYKDLEEQAN KKIQELEDNF 550 560 570 580 590 600 NNIKSDFEIG VDNYIKNTYT DLNNVTEKLS VLKEQYDNDS NKIQDLLKDT EINLKENIEK 610 620 630 640 650 660 RIELLDKTSS EIKDLVDSAN EKLDTGIKNA ESNIEEIRNN LYEYGNSYLD SLKSQLKEVL 670 680 690 700 710 720 DNYEETSMKS ISDSINSLVH QVEESDKRHN DIVSNMEDSL KEFKDKIDYS LNENKEFAED 730 740 750 760 770 780 NKNKIVNMLN TELLEATNSF DALLNEKREG INKVRDDIED ILNKVENGRE DFENTINRVY 790 800 810 820 830 840 DVANEKESNL LSNIEDKYKS LNDKIDDLFS ESKSDLDSMT KEYKGSLENY YNNLRNEYEQ 850 860 870 880 890 900 LKEHSDIISD EYRIKMDTLS SKLEELAFAS KNMEDSIENK TKDITDYVNS VKENVDAKSN 910 920 930 940 950 960 EVVSSVNSII EDIETKKENI NKYVDELKSN IDDKLDITDS YVNELRENID NIEKNSDEYL 970 980 990 1000 1010 1020 SALKDVVDDR LETVDSYVNE FKSNIDSKEK DSNYYIDALK NNIDDRLETA DSYVNDLKDN 1030 1040 1050 1060 1070 1080 IDSLKKAVNT EMQNVSSYIE ERKEFLNAKC DEAFNSVEEE ASNKLDELNE IIEAAIEKYN 1090 1100 1110 1120 1130 1140 DEIKEIESVR LEENANIIAD VENIGANIRK DYKKYTKILE EIYNNKKTSL DDYANELKND 1150 1160 1170 1180 1190 1200 IEKHREDAEK IHLENEANYI DDYLKTKSLE IDEKVNNINT TLNDSFNTLY NGVTELLEKA 1210 1220 1230 1240 1250 1260 KEYTDSAVSN QTLELSKALE LLRDGFNSYK DGLDSKLKEE IDNMISNNEN MLSMFNEYNE 1270 1280 1290 1300 1310 1320 KIERINDISN LVDSLKDDIY NELEELKSDV SFKNTEFDRT IDEIKSSIMS REELNDIQES 1330 1340 1350 1360 1370 1380 EREALNVQLD DMKEEFEIFK SQILKSNEVE IPALLEEERE RIENIFDEFS KNLLMRISDN 1390 1400 1410 1420 1430 1440 ESDLSYIKDV LSEERNHLIE KIELIEKDLE DIKTDNRVDA LVEDKLQLET SLDDLKSDIE 1450 1460 1470 1480 1490 1500 KVKNLEKDFI SLKDRMEGID STIKDDVASL SSKLIDFKDN LEEKISNDSS SLLEDLETLN 1510 1520 1530 1540 1550 1560 KELYDIKGNL SNSIDKTDNI ENRMENILKE LSSGNEEFKN RIEKRIEYFE DSWSDPTKIR 1570 1580 1590 1600 1610 1620 SMYANEIKEE INNLRAYSDE KFDVYINELK SQIDEISSGI EDWKNENINE LLSQLNDAKN 1630 1640 1650 1660 1670 1680 SIESYIKDTD SKKEELLSDI LKKLEAKEGE IYSRIDEKII DVDNKLSAID KKINDDIGSS 1690 1700 1710 1720 1730 1740 LENIYKMIND ASNKYNEEIK NIEHHRSNEK EAIISDLKSL SDSIRADYEE YSIMLDNAYN 1750 1760 1770 1780 1790 1800 TAVSALDEHL DNVKKEIENI KDESETELLN NEKNYINEYL EEYSNNLDSR LEEKLLVLEE 1810 1820 1830 1840 1850 1860 SKKELDNILN SSFENLNNRI EESLSKVNSL AEEKLISIEK DINDKLLVNV EKLSKLEEDF 1870 1880 1890 1900 1910 1920 GKLFNKDYVE ELDLRINSIN SKLEEEISNI RNSLDNDISS VRSQYKELSV DFEEALDLVK 1930 1940 1950 1960 1970 1980 KSILDRDEVI DLQSKEKDEL ISQLESLRDD YLSLKGDVSS VSDNNELYSL FEEEREKLER 1990 2000 2010 2020 2030 2040 GFEEFSSELL NRLNDTDSDI NYIKDMLSSD KNLLLEELDA LRLEVENVHN DERLNELLDY 2050 2060 2070 2080 2090 2100 KLSLEDSFNG IREELSKFDE LESSLNELRG SVSELEGSFN NSLEELKDNV GRQLEGYNVN 2110 2120 2130 2140 2150 2160 LNNLNSDINR LSNSVEDITS NNENISTNLD TISSNFEVLN NNFESVNGNV NDFNNRLSSF 2170 2180 2190 2200 2210 2220 KEDIDKAINK SLELENSISN YRKDLEDKLS GITNNINSLS NDSSVKDLFN EELSKLNNLF 2230 2240 2250 2260 2270 2280 DNLEKDNKEF RDRLERRVEY FEDTWSDSSR IRSLYSAELR EELENIKYER ELEFENYLEE 2290 2300 2310 2320 2330 2340 LRAKVDNLSS SVDNYKEGDI NRLLSELEQA KNGIESYIKD TDSKKEELLS SIMNELELKE 2350 2360 2370 2380 2390 2400 KAIHDRLEES KSNIDSYIKD ADIKKEEFLS SMMNELESKE KAIYDRLEDR VKDIENKLSM 2410 2420 2430 2440 2450 2460 LDNKVSNEVS RDLENFYNSL NEAVNNYKAE INTIEANSAE LSTDAINRIS EEIKNSYENY 2470 2480 2490 2500 2510 2520 VRDLEEVYNN SVSLLEEYSN NLKDELDSLK EENTEADKNY INEYLEEYSN NLDSRLEEKL 2530 2540 2550 2560 2570 2580 LVLEESKKEL DNILNSSFEN LNSRIEESLS KVNSLAEERI SSLEKDINDK LLANVDKLSK 2590 2600 2610 2620 2630 2640 LEEDFGKLFN KDYVEELDSR INSINSKLEE EISNIRNSLD NDISSVRSQY KELSVDFEEA 2650 2660 2670 2680 2690 2700 LDLVKKSILD RDEVIDLQSK EKDELISQLE SLRDDYLSLK GDVSSVSDNN ELYSLFEEER 2710 2720 2730 2740 2750 2760 EKLERGFEEF SSELLNRLND TDSDINYIKD MLSSDKNLLL EELDALRLEV ENVHNDERLN 2770 2780 2790 2800 2810 2820 ELLDYKLSLE DSFNGIREEL SKFDELESSL NELRDSVSEL DGSLLSSINA SIDELKKEYN 2830 2840 2850 2860 2870 2880 DVHLEIDKLN GSIEELSLNN ENISANLDTI SSNFEVLNNN FESVNGNVND FDNRLSSFKE 2890 2900 2910 2920 2930 2940 DVDKAINKSL ELENSISNYR KDLEDKLSGI TNNINSLSND SSVKDLFNEE LSKLNDLFDN 2950 2960 2970 2980 2990 3000 LEKDNKEFRD RLERRVEYFE DTWSDSARIR SLYSSDLREE LENIKYEREL EFENYLEELR 3010 3020 3030 3040 3050 3060 AKVDNLSSSV DNYKEGDINR LLSELEQAKN SIESYIKDTD SKKEELLSSI MNELESKEKA 3070 3080 3090 3100 3110 3120 IYDRLEDRVK DIENKLSVFD DKISNEVSRD LENFYNSLNE AVNNYKAEIN TIEANSAELS 3130 3140 3150 3160 3170 3180 ADTLNKISEE VKNSYENYVK DLEEVYNNSV SLLEEYSNNL KNELDSLKEE NTEADKNYIN 3190 3200 3210 3220 3230 3240 EYLEEYSNNL KDELENLKEE NAESQKNYID EYLQEYLNNI DSKLEDKLDI LNKAKEELDN 3250 3260 3270 3280 3290 3300 IIKASFDELN SNLNDTINKI NENTLNQNER ISIVESKLND YAEQISKLDD KEKLFYEYID 3310 3320 3330 3340 3350 3360 SKISELKEEY EALNKSFEDK FLSIESAVLS DEHVEALREE FANFKDTILE AKKSDIPSIF 3370 3380 3390 3400 3410 3420 EELKSQFEES FDMFTKEIFN RVSDSESMIS NIKNTMEDEK NTILDKIDNF KFELEALKNN 3430 3440 3450 3460 3470 3480 DTLNELEEER IKLEDTFNSL KEDFNKLDEL ENEVYFLKNN LEGVDGNLRI DVDRLFEEIS 3490 3500 3510 3520 3530 3540 EFKYSLEYKI DTLEDNTVSK EYFDEEKEKL YSLYDELNSS NDEFRDNINN RVAYFEDNLS 3550 3560 3570 3580 3590 3600 DPSKILKLYE DAITPEVNNL KNEIISNLKE QIDEVENGIS IWKDDSLYNL LEQLKEAKNN 3610 3620 3630 3640 3650 3660 IESFIDSTND KKESIVDDIV KAVREKIEDR ENELNESLES RIDSINDKVS DLESKLTSDI 3670 3680 3690 3700 3710 3720 NRFNNIITDA IDKYEDELKN IESYRLEESS SIMKDIDDVG KNIISNYESY AKLLNTAYEN 3730 3740 3750 3760 3770 3780 NSKSLEELCN NLKLEIEKAK LDANRGYIDV YLNDYSSKID AKLKEQMDSI EKSKESLDNI 3790 3800 3810 3820 3830 3840 ITDSLSDLNE NINNTISKAL ESSESKINDF INSKELELVN KISSYEDNTI SKDELSEELK 3850 3860 3870 3880 3890 3900 KIEESFELFK SNNNDIFSTL EEYKTKISSI VDSLSDIEDN NLNFTSRLEK RIEFFEDSWG 3910 3920 3930 3940 3950 3960 DGDKIKELYS DFIAEKADSF KSDLEVKFRD SFEEFNLKID NVEKNFADSI NSIIESLDKE 3970 3980 3990 4000 4010 4020 NLTSNERLES ISNTINNLKS DLENKIVSIE EANDKSKLFI DDKLSIFENK MEAFEDRIKD 4030 4040 4050 4060 4070 4080 VEDSQHYLNN DITQYVNRLD KVLNDYEEAI DTKINNLKNS LSNESGHVEH NLISSLELSN 4090 4100 4110 4120 4130 4140 ELAKDKKELL DSIHELKKDV YETIERKDAQ MNEEFSKFKT EIIESIPSME DISDLFVSEK 4150 4160 4170 4180 4190 4200 NNIVNEFEGF KNEILTSNNK NFADMFEEEK NKLIEELDNF KSAIRVEYMS NSDKIDAFKN 4210 4220 4230 4240 4250 4260 EYLKNFNEII DKEKANLYYA LNDIRKEFES LKDNSVPLDK FEELISEYKG SIDNSIDDTK 4270 4280 4290 4300 4310 4320 EKLSSNIADK DYVSKLFDEE IANINKTIEE FRKDLEENYS PTDVIAEILS KEQVDFENKL 4330 4340 4350 4360 4370 4380 SSLKESILKD IPTLEDISNI FVEEKMSLRE EFASFRDDIE SKISEEGHFE NIEEQYKLDM 4390 4400 4410 4420 4430 4440 KNNFAMLQEE VVGNINSYRD NMVNDISNFR DEFANKLSFI EELANSLLQE RERIALEVED 4450 4460 4470 4480 4490 4500 IRLKYETGTL YSDDAINTIE SDRNKLINEF INFRKTILEL IREQDEAMKV LNNEKMSIID 4510 4520 4530 4540 4550 4560 NIDELNKKVS LDLISKDDAI SLIDEQKKEI LDVLENFKGD SIEADFKYMT EELRDDIIKV 4570 4580 4590 4600 4610 4620 FEESNEAFRK RIEARIEHFE DAYSEPEKIK EFYRDAIDAE VDNIKESASH ILLDITDNVE 4630 4640 4650 4660 4670 4680 KVKKHIDDIE NEKVKSIIER IDNAQSEIDA IVDTIKVNLK EQENEIRLLS QSQKLISQDI 4690 4700 4710 4720 4730 4740 ENVRKEREAL IEMVKTSDVN INNKIDSLTS AVIEASDNAA ERIAEKELEF NRKIKEVEEY 4750 4760 4770 4780 4790 4800 IASMEEKIIN ENNEHLDKSK EAVNNLLASF NESILKETND LTPHIMKIVN EFVNNEMKKF 4810 4820 4830 4840 4850 4860 ERFNDVKQAI DEVELSINDK IDDTFKLMNS KLDDTAKELR DNMSSYQDEL LSELRNAVNS 4870 4880 4890 4900 4910 4920 ESERSIEEVK AMHEEELTKL KDMYLETEKY YSDRQERSKE DIVALFENTY KEWQDKINSL 4930 4940 4950 4960 4970 4980 YSELESTKES MHSSVDNLLD DLEKAIDAKE EFNKSLEDNK EKLKDVEEKM NNLQNEFSPS 4990 5000 5010 5020 5030 5040 IEKLQAIVEE KALELQNKIE LYSKDIEEEG NKFKSRLEEL SSNAKTSLDS KVVEFDSIID 5050 5060 5070 5080 5090 5100 NVANRINELL EDKNNQFDEL RTQYEDISIS LLELRESISD AVNEKIKEAN SIIEENITNI 5110 5120 5130 5140 5150 5160 EESANDKYDK YIDRLNSNME QTLSLLMNDA KEYVQNAKEE MLKVQSSNLD VYDERLAGMK 5170 5180 5190 5200 5210 5220 NIISALEDDI AKYSSEIDAR LEDINLKYED KTNVILKDLD SRTDSLTEKL NDVVNSIDKM 5230 5240 5250 5260 5270 5280 LDDKTYDINS EYETLKIQIE KIGKDIDKYM NTVKVFDKAE EMANFIKDDV AKLDVLVNDT 5290 5300 5310 5320 5330 5340 KNTVYDMNKT MSEFEELKNM HNTILDYAES IRKEKESLKD TQEKVNMLVE MSEEVQNKFI 5350 5360 5370 5380 5390 5400 QIAESNSMIE NTQEGIKVVI DIASQIENKL AIINDKEEQA NTILEKVNIA DNESDDILQR 5410 5420 5430 5440 5450 5460 IDTIKSAMLD IEDTRREFSD KMFALDREMA KIDKNDEKVQ KFFSKLEELN VIIEEIQNQR 5470 5480 5490 5500 5510 5520 ENLKYMKKQY EDYDNNIVKN LERAEYFVRY LETLLDNAEK YVNDAGKSLT KRSKTATTKI 5530 5540 5550 5560 NDKKENIIIN MYKQGWKYDE IVKNTSYDRD EVERVIKKWK DESARGY

References

[1]

"The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes." Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B., Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J. PLoS ONE 5:E11455-E11455(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1826 / 95/1000.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002025 Genomic DNA. Translation: ADK32218.1.
RefSeq	YP_003786719.1. NC_014330.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADK32218; ADK32218; BP951000_2245.
GeneID	9452362.
KEGG	bpo:BP951000_2245.
PATRIC	42198925. VBIBraPil164347_2207.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000096448.
Enzyme and pathway databases
BioCyc	BPIL759914:GHZ5-2243-MONOMER.
Family and domain databases
InterPro	IPR000074. ApoA1_A4_E. [Graphical view]
Pfam	PF01442. Apolipoprotein. 22 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8IA88_BRAP9

Accession

Primary (citable) accession number: D8IA88

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)