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D8IA88

- D8IA88_BRAP9

UniProt

D8IA88 - D8IA88_BRAP9

Protein
Submitted name:

DNA-directed RNA polymerase, omega subunit family protein-like protein

Gene

BP951000_2245

Organism
Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA-directed RNA polymerase activity Source: UniProtKB-KW
    2. lipid binding Source: InterPro

    GO - Biological processi

    1. lipid transport Source: InterPro
    2. lipoprotein metabolic process Source: InterPro

    Keywords - Biological processi

    Transcription

    Enzyme and pathway databases

    BioCyciBPIL759914:GHZ5-2242-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA-directed RNA polymerase, omega subunit family protein-like proteinImported
    Gene namesi
    Ordered Locus Names:BP951000_2245Imported
    OrganismiBrachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000)Imported
    Taxonomic identifieri759914 [NCBI]
    Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira
    ProteomesiUP000000332: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: InterPro

    Keywords - Cellular componenti

    DNA-directed RNA polymeraseImported

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000096448.

    Family and domain databases

    InterProiIPR000074. ApoA1_A4_E.
    [Graphical view]
    PfamiPF01442. Apolipoprotein. 22 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8IA88-1 [UniParc]FASTAAdd to Basket

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    MLIIPIIVVG ISKIIDRKKN NNNSNYDDIF AEEKAALEGI IEEKISEVRD     50
    NAIDLEIAVK KAGFISKSME EDLAKLNNKI ESYKDYKAAV SQYQEQVDSL 100
    EEAYLDILNK VDTVLKERNT IEKTYKRISD VKTKMIELEK NVSSIQDNLI 150
    ASYNAKLNDF ESELYKRFDA LTTNLLARDA HYTDMAEQEK DKISALTEEF 200
    KLHVAKKEEL FTNQLTQLAE RTARNNIEQL AELFEKGRDE LINKYSLFAE 250
    EINSKSKDIE ERYASLSQSK EGLEVELINL RDTIQERLNS ITESSVEEFK 300
    GEMEKTKEFL YNTLKEELEK IGNEKEEFLE SVEDKAHSLE KTIDDIKDKA 350
    ELITKDYEDK TVQLETEFTT LKNDISNRLI TEVEAFSNNI RNILENENDG 400
    VITLYRNKTK ELSDLIVSID GMSEETMLRA ESKFDEIVND IERLKNDILA 450
    RTQDDMEYSI DNARSSLIAE INELRADVET ETNILKDKMN EIHYQTSEIS 500
    SILTNKQEEI LDALSLEKEY LYKDLEEQAN KKIQELEDNF NNIKSDFEIG 550
    VDNYIKNTYT DLNNVTEKLS VLKEQYDNDS NKIQDLLKDT EINLKENIEK 600
    RIELLDKTSS EIKDLVDSAN EKLDTGIKNA ESNIEEIRNN LYEYGNSYLD 650
    SLKSQLKEVL DNYEETSMKS ISDSINSLVH QVEESDKRHN DIVSNMEDSL 700
    KEFKDKIDYS LNENKEFAED NKNKIVNMLN TELLEATNSF DALLNEKREG 750
    INKVRDDIED ILNKVENGRE DFENTINRVY DVANEKESNL LSNIEDKYKS 800
    LNDKIDDLFS ESKSDLDSMT KEYKGSLENY YNNLRNEYEQ LKEHSDIISD 850
    EYRIKMDTLS SKLEELAFAS KNMEDSIENK TKDITDYVNS VKENVDAKSN 900
    EVVSSVNSII EDIETKKENI NKYVDELKSN IDDKLDITDS YVNELRENID 950
    NIEKNSDEYL SALKDVVDDR LETVDSYVNE FKSNIDSKEK DSNYYIDALK 1000
    NNIDDRLETA DSYVNDLKDN IDSLKKAVNT EMQNVSSYIE ERKEFLNAKC 1050
    DEAFNSVEEE ASNKLDELNE IIEAAIEKYN DEIKEIESVR LEENANIIAD 1100
    VENIGANIRK DYKKYTKILE EIYNNKKTSL DDYANELKND IEKHREDAEK 1150
    IHLENEANYI DDYLKTKSLE IDEKVNNINT TLNDSFNTLY NGVTELLEKA 1200
    KEYTDSAVSN QTLELSKALE LLRDGFNSYK DGLDSKLKEE IDNMISNNEN 1250
    MLSMFNEYNE KIERINDISN LVDSLKDDIY NELEELKSDV SFKNTEFDRT 1300
    IDEIKSSIMS REELNDIQES EREALNVQLD DMKEEFEIFK SQILKSNEVE 1350
    IPALLEEERE RIENIFDEFS KNLLMRISDN ESDLSYIKDV LSEERNHLIE 1400
    KIELIEKDLE DIKTDNRVDA LVEDKLQLET SLDDLKSDIE KVKNLEKDFI 1450
    SLKDRMEGID STIKDDVASL SSKLIDFKDN LEEKISNDSS SLLEDLETLN 1500
    KELYDIKGNL SNSIDKTDNI ENRMENILKE LSSGNEEFKN RIEKRIEYFE 1550
    DSWSDPTKIR SMYANEIKEE INNLRAYSDE KFDVYINELK SQIDEISSGI 1600
    EDWKNENINE LLSQLNDAKN SIESYIKDTD SKKEELLSDI LKKLEAKEGE 1650
    IYSRIDEKII DVDNKLSAID KKINDDIGSS LENIYKMIND ASNKYNEEIK 1700
    NIEHHRSNEK EAIISDLKSL SDSIRADYEE YSIMLDNAYN TAVSALDEHL 1750
    DNVKKEIENI KDESETELLN NEKNYINEYL EEYSNNLDSR LEEKLLVLEE 1800
    SKKELDNILN SSFENLNNRI EESLSKVNSL AEEKLISIEK DINDKLLVNV 1850
    EKLSKLEEDF GKLFNKDYVE ELDLRINSIN SKLEEEISNI RNSLDNDISS 1900
    VRSQYKELSV DFEEALDLVK KSILDRDEVI DLQSKEKDEL ISQLESLRDD 1950
    YLSLKGDVSS VSDNNELYSL FEEEREKLER GFEEFSSELL NRLNDTDSDI 2000
    NYIKDMLSSD KNLLLEELDA LRLEVENVHN DERLNELLDY KLSLEDSFNG 2050
    IREELSKFDE LESSLNELRG SVSELEGSFN NSLEELKDNV GRQLEGYNVN 2100
    LNNLNSDINR LSNSVEDITS NNENISTNLD TISSNFEVLN NNFESVNGNV 2150
    NDFNNRLSSF KEDIDKAINK SLELENSISN YRKDLEDKLS GITNNINSLS 2200
    NDSSVKDLFN EELSKLNNLF DNLEKDNKEF RDRLERRVEY FEDTWSDSSR 2250
    IRSLYSAELR EELENIKYER ELEFENYLEE LRAKVDNLSS SVDNYKEGDI 2300
    NRLLSELEQA KNGIESYIKD TDSKKEELLS SIMNELELKE KAIHDRLEES 2350
    KSNIDSYIKD ADIKKEEFLS SMMNELESKE KAIYDRLEDR VKDIENKLSM 2400
    LDNKVSNEVS RDLENFYNSL NEAVNNYKAE INTIEANSAE LSTDAINRIS 2450
    EEIKNSYENY VRDLEEVYNN SVSLLEEYSN NLKDELDSLK EENTEADKNY 2500
    INEYLEEYSN NLDSRLEEKL LVLEESKKEL DNILNSSFEN LNSRIEESLS 2550
    KVNSLAEERI SSLEKDINDK LLANVDKLSK LEEDFGKLFN KDYVEELDSR 2600
    INSINSKLEE EISNIRNSLD NDISSVRSQY KELSVDFEEA LDLVKKSILD 2650
    RDEVIDLQSK EKDELISQLE SLRDDYLSLK GDVSSVSDNN ELYSLFEEER 2700
    EKLERGFEEF SSELLNRLND TDSDINYIKD MLSSDKNLLL EELDALRLEV 2750
    ENVHNDERLN ELLDYKLSLE DSFNGIREEL SKFDELESSL NELRDSVSEL 2800
    DGSLLSSINA SIDELKKEYN DVHLEIDKLN GSIEELSLNN ENISANLDTI 2850
    SSNFEVLNNN FESVNGNVND FDNRLSSFKE DVDKAINKSL ELENSISNYR 2900
    KDLEDKLSGI TNNINSLSND SSVKDLFNEE LSKLNDLFDN LEKDNKEFRD 2950
    RLERRVEYFE DTWSDSARIR SLYSSDLREE LENIKYEREL EFENYLEELR 3000
    AKVDNLSSSV DNYKEGDINR LLSELEQAKN SIESYIKDTD SKKEELLSSI 3050
    MNELESKEKA IYDRLEDRVK DIENKLSVFD DKISNEVSRD LENFYNSLNE 3100
    AVNNYKAEIN TIEANSAELS ADTLNKISEE VKNSYENYVK DLEEVYNNSV 3150
    SLLEEYSNNL KNELDSLKEE NTEADKNYIN EYLEEYSNNL KDELENLKEE 3200
    NAESQKNYID EYLQEYLNNI DSKLEDKLDI LNKAKEELDN IIKASFDELN 3250
    SNLNDTINKI NENTLNQNER ISIVESKLND YAEQISKLDD KEKLFYEYID 3300
    SKISELKEEY EALNKSFEDK FLSIESAVLS DEHVEALREE FANFKDTILE 3350
    AKKSDIPSIF EELKSQFEES FDMFTKEIFN RVSDSESMIS NIKNTMEDEK 3400
    NTILDKIDNF KFELEALKNN DTLNELEEER IKLEDTFNSL KEDFNKLDEL 3450
    ENEVYFLKNN LEGVDGNLRI DVDRLFEEIS EFKYSLEYKI DTLEDNTVSK 3500
    EYFDEEKEKL YSLYDELNSS NDEFRDNINN RVAYFEDNLS DPSKILKLYE 3550
    DAITPEVNNL KNEIISNLKE QIDEVENGIS IWKDDSLYNL LEQLKEAKNN 3600
    IESFIDSTND KKESIVDDIV KAVREKIEDR ENELNESLES RIDSINDKVS 3650
    DLESKLTSDI NRFNNIITDA IDKYEDELKN IESYRLEESS SIMKDIDDVG 3700
    KNIISNYESY AKLLNTAYEN NSKSLEELCN NLKLEIEKAK LDANRGYIDV 3750
    YLNDYSSKID AKLKEQMDSI EKSKESLDNI ITDSLSDLNE NINNTISKAL 3800
    ESSESKINDF INSKELELVN KISSYEDNTI SKDELSEELK KIEESFELFK 3850
    SNNNDIFSTL EEYKTKISSI VDSLSDIEDN NLNFTSRLEK RIEFFEDSWG 3900
    DGDKIKELYS DFIAEKADSF KSDLEVKFRD SFEEFNLKID NVEKNFADSI 3950
    NSIIESLDKE NLTSNERLES ISNTINNLKS DLENKIVSIE EANDKSKLFI 4000
    DDKLSIFENK MEAFEDRIKD VEDSQHYLNN DITQYVNRLD KVLNDYEEAI 4050
    DTKINNLKNS LSNESGHVEH NLISSLELSN ELAKDKKELL DSIHELKKDV 4100
    YETIERKDAQ MNEEFSKFKT EIIESIPSME DISDLFVSEK NNIVNEFEGF 4150
    KNEILTSNNK NFADMFEEEK NKLIEELDNF KSAIRVEYMS NSDKIDAFKN 4200
    EYLKNFNEII DKEKANLYYA LNDIRKEFES LKDNSVPLDK FEELISEYKG 4250
    SIDNSIDDTK EKLSSNIADK DYVSKLFDEE IANINKTIEE FRKDLEENYS 4300
    PTDVIAEILS KEQVDFENKL SSLKESILKD IPTLEDISNI FVEEKMSLRE 4350
    EFASFRDDIE SKISEEGHFE NIEEQYKLDM KNNFAMLQEE VVGNINSYRD 4400
    NMVNDISNFR DEFANKLSFI EELANSLLQE RERIALEVED IRLKYETGTL 4450
    YSDDAINTIE SDRNKLINEF INFRKTILEL IREQDEAMKV LNNEKMSIID 4500
    NIDELNKKVS LDLISKDDAI SLIDEQKKEI LDVLENFKGD SIEADFKYMT 4550
    EELRDDIIKV FEESNEAFRK RIEARIEHFE DAYSEPEKIK EFYRDAIDAE 4600
    VDNIKESASH ILLDITDNVE KVKKHIDDIE NEKVKSIIER IDNAQSEIDA 4650
    IVDTIKVNLK EQENEIRLLS QSQKLISQDI ENVRKEREAL IEMVKTSDVN 4700
    INNKIDSLTS AVIEASDNAA ERIAEKELEF NRKIKEVEEY IASMEEKIIN 4750
    ENNEHLDKSK EAVNNLLASF NESILKETND LTPHIMKIVN EFVNNEMKKF 4800
    ERFNDVKQAI DEVELSINDK IDDTFKLMNS KLDDTAKELR DNMSSYQDEL 4850
    LSELRNAVNS ESERSIEEVK AMHEEELTKL KDMYLETEKY YSDRQERSKE 4900
    DIVALFENTY KEWQDKINSL YSELESTKES MHSSVDNLLD DLEKAIDAKE 4950
    EFNKSLEDNK EKLKDVEEKM NNLQNEFSPS IEKLQAIVEE KALELQNKIE 5000
    LYSKDIEEEG NKFKSRLEEL SSNAKTSLDS KVVEFDSIID NVANRINELL 5050
    EDKNNQFDEL RTQYEDISIS LLELRESISD AVNEKIKEAN SIIEENITNI 5100
    EESANDKYDK YIDRLNSNME QTLSLLMNDA KEYVQNAKEE MLKVQSSNLD 5150
    VYDERLAGMK NIISALEDDI AKYSSEIDAR LEDINLKYED KTNVILKDLD 5200
    SRTDSLTEKL NDVVNSIDKM LDDKTYDINS EYETLKIQIE KIGKDIDKYM 5250
    NTVKVFDKAE EMANFIKDDV AKLDVLVNDT KNTVYDMNKT MSEFEELKNM 5300
    HNTILDYAES IRKEKESLKD TQEKVNMLVE MSEEVQNKFI QIAESNSMIE 5350
    NTQEGIKVVI DIASQIENKL AIINDKEEQA NTILEKVNIA DNESDDILQR 5400
    IDTIKSAMLD IEDTRREFSD KMFALDREMA KIDKNDEKVQ KFFSKLEELN 5450
    VIIEEIQNQR ENLKYMKKQY EDYDNNIVKN LERAEYFVRY LETLLDNAEK 5500
    YVNDAGKSLT KRSKTATTKI NDKKENIIIN MYKQGWKYDE IVKNTSYDRD 5550
    EVERVIKKWK DESARGY 5567
    Length:5,567
    Mass (Da):648,753
    Last modified:October 5, 2010 - v1
    Checksum:iA139DA3B591C6DE4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002025 Genomic DNA. Translation: ADK32218.1.
    RefSeqiWP_013245167.1. NC_014330.1.
    YP_003786719.1. NC_014330.1.

    Genome annotation databases

    EnsemblBacteriaiADK32218; ADK32218; BP951000_2245.
    GeneIDi9452362.
    KEGGibpo:BP951000_2245.
    PATRICi42198925. VBIBraPil164347_2207.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002025 Genomic DNA. Translation: ADK32218.1 .
    RefSeqi WP_013245167.1. NC_014330.1.
    YP_003786719.1. NC_014330.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADK32218 ; ADK32218 ; BP951000_2245 .
    GeneIDi 9452362.
    KEGGi bpo:BP951000_2245.
    PATRICi 42198925. VBIBraPil164347_2207.

    Phylogenomic databases

    HOGENOMi HOG000096448.

    Enzyme and pathway databases

    BioCyci BPIL759914:GHZ5-2242-MONOMER.

    Family and domain databases

    InterProi IPR000074. ApoA1_A4_E.
    [Graphical view ]
    Pfami PF01442. Apolipoprotein. 22 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes."
      Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B., Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J.
      PLoS ONE 5:E11455-E11455(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1826 / 95/1000Imported.

    Entry informationi

    Entry nameiD8IA88_BRAP9
    AccessioniPrimary (citable) accession number: D8IA88
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3