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D8IA88 (D8IA88_BRAP9) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BP951000_2245 EMBL ADK32218.1
OrganismBrachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000) [Complete proteome] [HAMAP] EMBL ADK32218.1
Taxonomic identifier759914 [NCBI]
Taxonomic lineageBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira

Protein attributes

Sequence length5567 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase EMBL ADK32218.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processlipid transport

Inferred from electronic annotation. Source: InterPro

lipoprotein metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

lipid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8IA88 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: A139DA3B591C6DE4

FASTA5,567648,753
        10         20         30         40         50         60 
MLIIPIIVVG ISKIIDRKKN NNNSNYDDIF AEEKAALEGI IEEKISEVRD NAIDLEIAVK 

        70         80         90        100        110        120 
KAGFISKSME EDLAKLNNKI ESYKDYKAAV SQYQEQVDSL EEAYLDILNK VDTVLKERNT 

       130        140        150        160        170        180 
IEKTYKRISD VKTKMIELEK NVSSIQDNLI ASYNAKLNDF ESELYKRFDA LTTNLLARDA 

       190        200        210        220        230        240 
HYTDMAEQEK DKISALTEEF KLHVAKKEEL FTNQLTQLAE RTARNNIEQL AELFEKGRDE 

       250        260        270        280        290        300 
LINKYSLFAE EINSKSKDIE ERYASLSQSK EGLEVELINL RDTIQERLNS ITESSVEEFK 

       310        320        330        340        350        360 
GEMEKTKEFL YNTLKEELEK IGNEKEEFLE SVEDKAHSLE KTIDDIKDKA ELITKDYEDK 

       370        380        390        400        410        420 
TVQLETEFTT LKNDISNRLI TEVEAFSNNI RNILENENDG VITLYRNKTK ELSDLIVSID 

       430        440        450        460        470        480 
GMSEETMLRA ESKFDEIVND IERLKNDILA RTQDDMEYSI DNARSSLIAE INELRADVET 

       490        500        510        520        530        540 
ETNILKDKMN EIHYQTSEIS SILTNKQEEI LDALSLEKEY LYKDLEEQAN KKIQELEDNF 

       550        560        570        580        590        600 
NNIKSDFEIG VDNYIKNTYT DLNNVTEKLS VLKEQYDNDS NKIQDLLKDT EINLKENIEK 

       610        620        630        640        650        660 
RIELLDKTSS EIKDLVDSAN EKLDTGIKNA ESNIEEIRNN LYEYGNSYLD SLKSQLKEVL 

       670        680        690        700        710        720 
DNYEETSMKS ISDSINSLVH QVEESDKRHN DIVSNMEDSL KEFKDKIDYS LNENKEFAED 

       730        740        750        760        770        780 
NKNKIVNMLN TELLEATNSF DALLNEKREG INKVRDDIED ILNKVENGRE DFENTINRVY 

       790        800        810        820        830        840 
DVANEKESNL LSNIEDKYKS LNDKIDDLFS ESKSDLDSMT KEYKGSLENY YNNLRNEYEQ 

       850        860        870        880        890        900 
LKEHSDIISD EYRIKMDTLS SKLEELAFAS KNMEDSIENK TKDITDYVNS VKENVDAKSN 

       910        920        930        940        950        960 
EVVSSVNSII EDIETKKENI NKYVDELKSN IDDKLDITDS YVNELRENID NIEKNSDEYL 

       970        980        990       1000       1010       1020 
SALKDVVDDR LETVDSYVNE FKSNIDSKEK DSNYYIDALK NNIDDRLETA DSYVNDLKDN 

      1030       1040       1050       1060       1070       1080 
IDSLKKAVNT EMQNVSSYIE ERKEFLNAKC DEAFNSVEEE ASNKLDELNE IIEAAIEKYN 

      1090       1100       1110       1120       1130       1140 
DEIKEIESVR LEENANIIAD VENIGANIRK DYKKYTKILE EIYNNKKTSL DDYANELKND 

      1150       1160       1170       1180       1190       1200 
IEKHREDAEK IHLENEANYI DDYLKTKSLE IDEKVNNINT TLNDSFNTLY NGVTELLEKA 

      1210       1220       1230       1240       1250       1260 
KEYTDSAVSN QTLELSKALE LLRDGFNSYK DGLDSKLKEE IDNMISNNEN MLSMFNEYNE 

      1270       1280       1290       1300       1310       1320 
KIERINDISN LVDSLKDDIY NELEELKSDV SFKNTEFDRT IDEIKSSIMS REELNDIQES 

      1330       1340       1350       1360       1370       1380 
EREALNVQLD DMKEEFEIFK SQILKSNEVE IPALLEEERE RIENIFDEFS KNLLMRISDN 

      1390       1400       1410       1420       1430       1440 
ESDLSYIKDV LSEERNHLIE KIELIEKDLE DIKTDNRVDA LVEDKLQLET SLDDLKSDIE 

      1450       1460       1470       1480       1490       1500 
KVKNLEKDFI SLKDRMEGID STIKDDVASL SSKLIDFKDN LEEKISNDSS SLLEDLETLN 

      1510       1520       1530       1540       1550       1560 
KELYDIKGNL SNSIDKTDNI ENRMENILKE LSSGNEEFKN RIEKRIEYFE DSWSDPTKIR 

      1570       1580       1590       1600       1610       1620 
SMYANEIKEE INNLRAYSDE KFDVYINELK SQIDEISSGI EDWKNENINE LLSQLNDAKN 

      1630       1640       1650       1660       1670       1680 
SIESYIKDTD SKKEELLSDI LKKLEAKEGE IYSRIDEKII DVDNKLSAID KKINDDIGSS 

      1690       1700       1710       1720       1730       1740 
LENIYKMIND ASNKYNEEIK NIEHHRSNEK EAIISDLKSL SDSIRADYEE YSIMLDNAYN 

      1750       1760       1770       1780       1790       1800 
TAVSALDEHL DNVKKEIENI KDESETELLN NEKNYINEYL EEYSNNLDSR LEEKLLVLEE 

      1810       1820       1830       1840       1850       1860 
SKKELDNILN SSFENLNNRI EESLSKVNSL AEEKLISIEK DINDKLLVNV EKLSKLEEDF 

      1870       1880       1890       1900       1910       1920 
GKLFNKDYVE ELDLRINSIN SKLEEEISNI RNSLDNDISS VRSQYKELSV DFEEALDLVK 

      1930       1940       1950       1960       1970       1980 
KSILDRDEVI DLQSKEKDEL ISQLESLRDD YLSLKGDVSS VSDNNELYSL FEEEREKLER 

      1990       2000       2010       2020       2030       2040 
GFEEFSSELL NRLNDTDSDI NYIKDMLSSD KNLLLEELDA LRLEVENVHN DERLNELLDY 

      2050       2060       2070       2080       2090       2100 
KLSLEDSFNG IREELSKFDE LESSLNELRG SVSELEGSFN NSLEELKDNV GRQLEGYNVN 

      2110       2120       2130       2140       2150       2160 
LNNLNSDINR LSNSVEDITS NNENISTNLD TISSNFEVLN NNFESVNGNV NDFNNRLSSF 

      2170       2180       2190       2200       2210       2220 
KEDIDKAINK SLELENSISN YRKDLEDKLS GITNNINSLS NDSSVKDLFN EELSKLNNLF 

      2230       2240       2250       2260       2270       2280 
DNLEKDNKEF RDRLERRVEY FEDTWSDSSR IRSLYSAELR EELENIKYER ELEFENYLEE 

      2290       2300       2310       2320       2330       2340 
LRAKVDNLSS SVDNYKEGDI NRLLSELEQA KNGIESYIKD TDSKKEELLS SIMNELELKE 

      2350       2360       2370       2380       2390       2400 
KAIHDRLEES KSNIDSYIKD ADIKKEEFLS SMMNELESKE KAIYDRLEDR VKDIENKLSM 

      2410       2420       2430       2440       2450       2460 
LDNKVSNEVS RDLENFYNSL NEAVNNYKAE INTIEANSAE LSTDAINRIS EEIKNSYENY 

      2470       2480       2490       2500       2510       2520 
VRDLEEVYNN SVSLLEEYSN NLKDELDSLK EENTEADKNY INEYLEEYSN NLDSRLEEKL 

      2530       2540       2550       2560       2570       2580 
LVLEESKKEL DNILNSSFEN LNSRIEESLS KVNSLAEERI SSLEKDINDK LLANVDKLSK 

      2590       2600       2610       2620       2630       2640 
LEEDFGKLFN KDYVEELDSR INSINSKLEE EISNIRNSLD NDISSVRSQY KELSVDFEEA 

      2650       2660       2670       2680       2690       2700 
LDLVKKSILD RDEVIDLQSK EKDELISQLE SLRDDYLSLK GDVSSVSDNN ELYSLFEEER 

      2710       2720       2730       2740       2750       2760 
EKLERGFEEF SSELLNRLND TDSDINYIKD MLSSDKNLLL EELDALRLEV ENVHNDERLN 

      2770       2780       2790       2800       2810       2820 
ELLDYKLSLE DSFNGIREEL SKFDELESSL NELRDSVSEL DGSLLSSINA SIDELKKEYN 

      2830       2840       2850       2860       2870       2880 
DVHLEIDKLN GSIEELSLNN ENISANLDTI SSNFEVLNNN FESVNGNVND FDNRLSSFKE 

      2890       2900       2910       2920       2930       2940 
DVDKAINKSL ELENSISNYR KDLEDKLSGI TNNINSLSND SSVKDLFNEE LSKLNDLFDN 

      2950       2960       2970       2980       2990       3000 
LEKDNKEFRD RLERRVEYFE DTWSDSARIR SLYSSDLREE LENIKYEREL EFENYLEELR 

      3010       3020       3030       3040       3050       3060 
AKVDNLSSSV DNYKEGDINR LLSELEQAKN SIESYIKDTD SKKEELLSSI MNELESKEKA 

      3070       3080       3090       3100       3110       3120 
IYDRLEDRVK DIENKLSVFD DKISNEVSRD LENFYNSLNE AVNNYKAEIN TIEANSAELS 

      3130       3140       3150       3160       3170       3180 
ADTLNKISEE VKNSYENYVK DLEEVYNNSV SLLEEYSNNL KNELDSLKEE NTEADKNYIN 

      3190       3200       3210       3220       3230       3240 
EYLEEYSNNL KDELENLKEE NAESQKNYID EYLQEYLNNI DSKLEDKLDI LNKAKEELDN 

      3250       3260       3270       3280       3290       3300 
IIKASFDELN SNLNDTINKI NENTLNQNER ISIVESKLND YAEQISKLDD KEKLFYEYID 

      3310       3320       3330       3340       3350       3360 
SKISELKEEY EALNKSFEDK FLSIESAVLS DEHVEALREE FANFKDTILE AKKSDIPSIF 

      3370       3380       3390       3400       3410       3420 
EELKSQFEES FDMFTKEIFN RVSDSESMIS NIKNTMEDEK NTILDKIDNF KFELEALKNN 

      3430       3440       3450       3460       3470       3480 
DTLNELEEER IKLEDTFNSL KEDFNKLDEL ENEVYFLKNN LEGVDGNLRI DVDRLFEEIS 

      3490       3500       3510       3520       3530       3540 
EFKYSLEYKI DTLEDNTVSK EYFDEEKEKL YSLYDELNSS NDEFRDNINN RVAYFEDNLS 

      3550       3560       3570       3580       3590       3600 
DPSKILKLYE DAITPEVNNL KNEIISNLKE QIDEVENGIS IWKDDSLYNL LEQLKEAKNN 

      3610       3620       3630       3640       3650       3660 
IESFIDSTND KKESIVDDIV KAVREKIEDR ENELNESLES RIDSINDKVS DLESKLTSDI 

      3670       3680       3690       3700       3710       3720 
NRFNNIITDA IDKYEDELKN IESYRLEESS SIMKDIDDVG KNIISNYESY AKLLNTAYEN 

      3730       3740       3750       3760       3770       3780 
NSKSLEELCN NLKLEIEKAK LDANRGYIDV YLNDYSSKID AKLKEQMDSI EKSKESLDNI 

      3790       3800       3810       3820       3830       3840 
ITDSLSDLNE NINNTISKAL ESSESKINDF INSKELELVN KISSYEDNTI SKDELSEELK 

      3850       3860       3870       3880       3890       3900 
KIEESFELFK SNNNDIFSTL EEYKTKISSI VDSLSDIEDN NLNFTSRLEK RIEFFEDSWG 

      3910       3920       3930       3940       3950       3960 
DGDKIKELYS DFIAEKADSF KSDLEVKFRD SFEEFNLKID NVEKNFADSI NSIIESLDKE 

      3970       3980       3990       4000       4010       4020 
NLTSNERLES ISNTINNLKS DLENKIVSIE EANDKSKLFI DDKLSIFENK MEAFEDRIKD 

      4030       4040       4050       4060       4070       4080 
VEDSQHYLNN DITQYVNRLD KVLNDYEEAI DTKINNLKNS LSNESGHVEH NLISSLELSN 

      4090       4100       4110       4120       4130       4140 
ELAKDKKELL DSIHELKKDV YETIERKDAQ MNEEFSKFKT EIIESIPSME DISDLFVSEK 

      4150       4160       4170       4180       4190       4200 
NNIVNEFEGF KNEILTSNNK NFADMFEEEK NKLIEELDNF KSAIRVEYMS NSDKIDAFKN 

      4210       4220       4230       4240       4250       4260 
EYLKNFNEII DKEKANLYYA LNDIRKEFES LKDNSVPLDK FEELISEYKG SIDNSIDDTK 

      4270       4280       4290       4300       4310       4320 
EKLSSNIADK DYVSKLFDEE IANINKTIEE FRKDLEENYS PTDVIAEILS KEQVDFENKL 

      4330       4340       4350       4360       4370       4380 
SSLKESILKD IPTLEDISNI FVEEKMSLRE EFASFRDDIE SKISEEGHFE NIEEQYKLDM 

      4390       4400       4410       4420       4430       4440 
KNNFAMLQEE VVGNINSYRD NMVNDISNFR DEFANKLSFI EELANSLLQE RERIALEVED 

      4450       4460       4470       4480       4490       4500 
IRLKYETGTL YSDDAINTIE SDRNKLINEF INFRKTILEL IREQDEAMKV LNNEKMSIID 

      4510       4520       4530       4540       4550       4560 
NIDELNKKVS LDLISKDDAI SLIDEQKKEI LDVLENFKGD SIEADFKYMT EELRDDIIKV 

      4570       4580       4590       4600       4610       4620 
FEESNEAFRK RIEARIEHFE DAYSEPEKIK EFYRDAIDAE VDNIKESASH ILLDITDNVE 

      4630       4640       4650       4660       4670       4680 
KVKKHIDDIE NEKVKSIIER IDNAQSEIDA IVDTIKVNLK EQENEIRLLS QSQKLISQDI 

      4690       4700       4710       4720       4730       4740 
ENVRKEREAL IEMVKTSDVN INNKIDSLTS AVIEASDNAA ERIAEKELEF NRKIKEVEEY 

      4750       4760       4770       4780       4790       4800 
IASMEEKIIN ENNEHLDKSK EAVNNLLASF NESILKETND LTPHIMKIVN EFVNNEMKKF 

      4810       4820       4830       4840       4850       4860 
ERFNDVKQAI DEVELSINDK IDDTFKLMNS KLDDTAKELR DNMSSYQDEL LSELRNAVNS 

      4870       4880       4890       4900       4910       4920 
ESERSIEEVK AMHEEELTKL KDMYLETEKY YSDRQERSKE DIVALFENTY KEWQDKINSL 

      4930       4940       4950       4960       4970       4980 
YSELESTKES MHSSVDNLLD DLEKAIDAKE EFNKSLEDNK EKLKDVEEKM NNLQNEFSPS 

      4990       5000       5010       5020       5030       5040 
IEKLQAIVEE KALELQNKIE LYSKDIEEEG NKFKSRLEEL SSNAKTSLDS KVVEFDSIID 

      5050       5060       5070       5080       5090       5100 
NVANRINELL EDKNNQFDEL RTQYEDISIS LLELRESISD AVNEKIKEAN SIIEENITNI 

      5110       5120       5130       5140       5150       5160 
EESANDKYDK YIDRLNSNME QTLSLLMNDA KEYVQNAKEE MLKVQSSNLD VYDERLAGMK 

      5170       5180       5190       5200       5210       5220 
NIISALEDDI AKYSSEIDAR LEDINLKYED KTNVILKDLD SRTDSLTEKL NDVVNSIDKM 

      5230       5240       5250       5260       5270       5280 
LDDKTYDINS EYETLKIQIE KIGKDIDKYM NTVKVFDKAE EMANFIKDDV AKLDVLVNDT 

      5290       5300       5310       5320       5330       5340 
KNTVYDMNKT MSEFEELKNM HNTILDYAES IRKEKESLKD TQEKVNMLVE MSEEVQNKFI 

      5350       5360       5370       5380       5390       5400 
QIAESNSMIE NTQEGIKVVI DIASQIENKL AIINDKEEQA NTILEKVNIA DNESDDILQR 

      5410       5420       5430       5440       5450       5460 
IDTIKSAMLD IEDTRREFSD KMFALDREMA KIDKNDEKVQ KFFSKLEELN VIIEEIQNQR 

      5470       5480       5490       5500       5510       5520 
ENLKYMKKQY EDYDNNIVKN LERAEYFVRY LETLLDNAEK YVNDAGKSLT KRSKTATTKI 

      5530       5540       5550       5560 
NDKKENIIIN MYKQGWKYDE IVKNTSYDRD EVERVIKKWK DESARGY 

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References

[1]"The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes."
Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B., Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J.
PLoS ONE 5:E11455-E11455(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1826 / 95/1000.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002025 Genomic DNA. Translation: ADK32218.1.
RefSeqYP_003786719.1. NC_014330.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADK32218; ADK32218; BP951000_2245.
GeneID9452362.
KEGGbpo:BP951000_2245.
PATRIC42198925. VBIBraPil164347_2207.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000096448.

Enzyme and pathway databases

BioCycBPIL759914:GHZ5-2242-MONOMER.

Family and domain databases

InterProIPR000074. ApoA1_A4_E.
[Graphical view]
PfamPF01442. Apolipoprotein. 22 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8IA88_BRAP9
AccessionPrimary (citable) accession number: D8IA88
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)