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D8I7T2 (D8I7T2_AMYMU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:dgoA EMBL ADJ48955.1
Ordered Locus Names:AMED_7238 EMBL ADJ48955.1
OrganismAmycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ48955.1
Taxonomic identifier749927 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcellular amino acid catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8I7T2 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: FDD93A1E73AC574F

FASTA37940,906
        10         20         30         40         50         60 
MRITDLQTHH VGRYLFVSVY TDVGITGLGE VGAWAYLDAV EAILDKWRRY LVGQDPARIE 

        70         80         90        100        110        120 
HHWQYLYQST FFRGAIVLSA LAAVDIALWD IKGKRLGVPV HELFGGPTRD RVRSYAPVFG 

       130        140        150        160        170        180 
STAEEMAAGC VELRDQGFTA ARLVLPSFAE QRWERGAESY AGRVDDAVRK VLACREAVGP 

       190        200        210        220        230        240 
GFDLCVEAHR SLSVPEAIAV GRGIEQARPL FFEDPIAPES PDAMAEVARA VPVPIATGER 

       250        260        270        280        290        300 
AISVQEIQAL LTRGATRYVR PDVCAVGGLT PARKIAALAE AHYVAIVPHN PLGPVSTAAC 

       310        320        330        340        350        360 
LHLDASVPNF LIQEHPSFNT DGGEDVMIKD PLQFEAGYLA VPGAPGIGIE LAPDAETLFP 

       370 
PAPRDLTPAL AFDGSVQAR 

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References

[1]"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. expand/collapse author list , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: U-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002000 Genomic DNA. Translation: ADJ48955.1.
RefSeqYP_003769357.1. NC_014318.1.

3D structure databases

ProteinModelPortalD8I7T2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ48955; ADJ48955; AMED_7238.
GeneID9441389.
KEGGamd:AMED_7238.
PATRIC42161999. VBIAmyMed151214_7526.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000113756.
KOK01684.
OMAEANITNF.

Enzyme and pathway databases

BioCycAMED749927:GCZN-7180-MONOMER.

Family and domain databases

Gene3D3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProIPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR018110. Mandel_Rmase/mucon_lact_enz_CS.
IPR013342. Mandelate_racemase_C.
IPR013341. Mandelate_racemase_N.
IPR001354. MR_MLE.
[Graphical view]
PANTHERPTHR13794. PTHR13794. 1 hit.
PfamPF02746. MR_MLE_N. 1 hit.
[Graphical view]
SMARTSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.
PROSITEPS00908. MR_MLE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8I7T2_AMYMU
AccessionPrimary (citable) accession number: D8I7T2
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)