D8I5U0 (D8I5U0_AMYMU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ADJ45179.1

Gene names

Ordered Locus Names:

AMED_3393

Organism

Amycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ45179.1

Taxonomic identifier

749927 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	640 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8I5U0 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 3CE43A2125F71880	FASTA	640	69,749
	10 20 30 40 50 60 MDVRTDRQAE QEQAAAARAA ERTGPRQAKI ALLRKPGGIA EADEPSRIAT RIDRLGRYYP 70 80 90 100 110 120 DIRPVSPAAI AAGDPAAMTA AGAILERIVL TNDLLGVGYL EGGVAASAAV GRVNIRNAQG 130 140 150 160 170 180 RLIGYGTGSL VSPELLLTNH HVLPDAEAAG FSVIEFDYQD GIDGLPRPVR AFTLDPDRFF 190 200 210 220 230 240 AADQELDFAL VAVKATADEL RPFGFNRLIA SEGKAIVGDF VTIVQHPGGG KKQIALRENR 250 260 270 280 290 300 VVDVLEEFLH YETDTEPGSS GSPVFNDQWE VVALHHASVP AAGHAEYGGF LNEGIRVSKL 310 320 330 340 350 360 LKFLREQKFA PAQQALLDRL ATRPERAQPA ADGAAPVLTL SMPFDIRLRA EAATGRIDPD 370 380 390 400 410 420 YSNREGYDPA FLPGHTVPLP GLPDALAGLA AINRQARGEP KYVLPYHHFS VVMHRERRLA 430 440 450 460 470 480 MFTAVNIDGR TSRSLRREAD HWSLDPRVAV TEQIGEEIYR DNPLDRGHLV RRLDPAWGAT 490 500 510 520 530 540 EAIAQLGNDD TFHFTNCSPQ HKDFNQNKTT WAGLEDYILT NADNFDLKVT VVTGPVLAPD 550 560 570 580 590 600 DDQYRGVQLP RQFWKVVAMV KTGGALSATA YLLSQEELIH GLEAATEFDY GAYRTYQVPV 610 620 630 640 RRIAELTGLS FGDLEAADPL AGLESTSVAQ EIRTVADLVL

References

[1]

"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism." Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P. Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: U-32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002000 Genomic DNA. Translation: ADJ45179.1.
RefSeq	YP_003765581.1. NC_014318.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADJ45179; ADJ45179; AMED_3393.
GeneID	9437589.
KEGG	amd:AMED_3393.
PATRIC	42153910. VBIAmyMed151214_3504.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000274111.
KO	K01173.
Family and domain databases
Gene3D	3.40.570.10. 1 hit.
InterPro	IPR001604. DNA/RNA_non-sp_Endonuclease. IPR020821. Extracellular_endonuc_su_A. IPR009003. Trypsin-like_Pept_dom. [Graphical view]
Pfam	PF01223. Endonuclease_NS. 1 hit. [Graphical view]
SMART	SM00892. Endonuclease_NS. 1 hit. SM00477. NUC. 1 hit. [Graphical view]
SUPFAM	SSF50494. Pept_Ser_Cys. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8I5U0_AMYMU

Accession

Primary (citable) accession number: D8I5U0

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)