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D8I5U0

- D8I5U0_AMYMU

UniProt

D8I5U0 - D8I5U0_AMYMU

Protein
Submitted name:

Uncharacterized protein

Gene

AMED_3393

Organism
Amycolatopsis mediterranei (strain U-32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. hydrolase activity Source: InterPro
    2. metal ion binding Source: InterPro
    3. nucleic acid binding Source: InterPro

    Enzyme and pathway databases

    BioCyciAMED749927:GCZN-3380-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:AMED_3393Imported
    OrganismiAmycolatopsis mediterranei (strain U-32)Imported
    Taxonomic identifieri749927 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
    ProteomesiUP000000328: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000274111.
    KOiK01173.
    OMAiTNCSPQH.

    Family and domain databases

    Gene3Di3.40.570.10. 1 hit.
    InterProiIPR001604. DNA/RNA_non-sp_Endonuclease.
    IPR020821. Extracellular_endonuc_su_A.
    IPR009003. Trypsin-like_Pept_dom.
    [Graphical view]
    PfamiPF01223. Endonuclease_NS. 1 hit.
    [Graphical view]
    SMARTiSM00892. Endonuclease_NS. 1 hit.
    SM00477. NUC. 1 hit.
    [Graphical view]
    SUPFAMiSSF50494. SSF50494. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D8I5U0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDVRTDRQAE QEQAAAARAA ERTGPRQAKI ALLRKPGGIA EADEPSRIAT    50
    RIDRLGRYYP DIRPVSPAAI AAGDPAAMTA AGAILERIVL TNDLLGVGYL 100
    EGGVAASAAV GRVNIRNAQG RLIGYGTGSL VSPELLLTNH HVLPDAEAAG 150
    FSVIEFDYQD GIDGLPRPVR AFTLDPDRFF AADQELDFAL VAVKATADEL 200
    RPFGFNRLIA SEGKAIVGDF VTIVQHPGGG KKQIALRENR VVDVLEEFLH 250
    YETDTEPGSS GSPVFNDQWE VVALHHASVP AAGHAEYGGF LNEGIRVSKL 300
    LKFLREQKFA PAQQALLDRL ATRPERAQPA ADGAAPVLTL SMPFDIRLRA 350
    EAATGRIDPD YSNREGYDPA FLPGHTVPLP GLPDALAGLA AINRQARGEP 400
    KYVLPYHHFS VVMHRERRLA MFTAVNIDGR TSRSLRREAD HWSLDPRVAV 450
    TEQIGEEIYR DNPLDRGHLV RRLDPAWGAT EAIAQLGNDD TFHFTNCSPQ 500
    HKDFNQNKTT WAGLEDYILT NADNFDLKVT VVTGPVLAPD DDQYRGVQLP 550
    RQFWKVVAMV KTGGALSATA YLLSQEELIH GLEAATEFDY GAYRTYQVPV 600
    RRIAELTGLS FGDLEAADPL AGLESTSVAQ EIRTVADLVL 640
    Length:640
    Mass (Da):69,749
    Last modified:October 5, 2010 - v1
    Checksum:i3CE43A2125F71880
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002000 Genomic DNA. Translation: ADJ45179.1.
    RefSeqiYP_003765581.1. NC_014318.1.

    Genome annotation databases

    EnsemblBacteriaiADJ45179; ADJ45179; AMED_3393.
    GeneIDi9437589.
    KEGGiamd:AMED_3393.
    PATRICi42153910. VBIAmyMed151214_3504.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002000 Genomic DNA. Translation: ADJ45179.1 .
    RefSeqi YP_003765581.1. NC_014318.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADJ45179 ; ADJ45179 ; AMED_3393 .
    GeneIDi 9437589.
    KEGGi amd:AMED_3393.
    PATRICi 42153910. VBIAmyMed151214_3504.

    Phylogenomic databases

    HOGENOMi HOG000274111.
    KOi K01173.
    OMAi TNCSPQH.

    Enzyme and pathway databases

    BioCyci AMED749927:GCZN-3380-MONOMER.

    Family and domain databases

    Gene3Di 3.40.570.10. 1 hit.
    InterProi IPR001604. DNA/RNA_non-sp_Endonuclease.
    IPR020821. Extracellular_endonuc_su_A.
    IPR009003. Trypsin-like_Pept_dom.
    [Graphical view ]
    Pfami PF01223. Endonuclease_NS. 1 hit.
    [Graphical view ]
    SMARTi SM00892. Endonuclease_NS. 1 hit.
    SM00477. NUC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50494. SSF50494. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
      Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y.
      , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
      Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: U-32Imported.

    Entry informationi

    Entry nameiD8I5U0_AMYMU
    AccessioniPrimary (citable) accession number: D8I5U0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3