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D8I5U0

- D8I5U0_AMYMU

UniProt

D8I5U0 - D8I5U0_AMYMU

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Protein
Submitted name:

Uncharacterized protein

Gene

AMED_3393

Organism
Amycolatopsis mediterranei (strain U-32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: InterPro
  2. metal ion binding Source: InterPro
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAMED749927:GCZN-3380-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:AMED_3393Imported
OrganismiAmycolatopsis mediterranei (strain U-32)Imported
Taxonomic identifieri749927 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000000328: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000274111.
KOiK01173.
OMAiTNCSPQH.

Family and domain databases

Gene3Di3.40.570.10. 1 hit.
InterProiIPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF01223. Endonuclease_NS. 1 hit.
[Graphical view]
SMARTiSM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.

Sequencei

Sequence statusi: Complete.

D8I5U0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDVRTDRQAE QEQAAAARAA ERTGPRQAKI ALLRKPGGIA EADEPSRIAT
60 70 80 90 100
RIDRLGRYYP DIRPVSPAAI AAGDPAAMTA AGAILERIVL TNDLLGVGYL
110 120 130 140 150
EGGVAASAAV GRVNIRNAQG RLIGYGTGSL VSPELLLTNH HVLPDAEAAG
160 170 180 190 200
FSVIEFDYQD GIDGLPRPVR AFTLDPDRFF AADQELDFAL VAVKATADEL
210 220 230 240 250
RPFGFNRLIA SEGKAIVGDF VTIVQHPGGG KKQIALRENR VVDVLEEFLH
260 270 280 290 300
YETDTEPGSS GSPVFNDQWE VVALHHASVP AAGHAEYGGF LNEGIRVSKL
310 320 330 340 350
LKFLREQKFA PAQQALLDRL ATRPERAQPA ADGAAPVLTL SMPFDIRLRA
360 370 380 390 400
EAATGRIDPD YSNREGYDPA FLPGHTVPLP GLPDALAGLA AINRQARGEP
410 420 430 440 450
KYVLPYHHFS VVMHRERRLA MFTAVNIDGR TSRSLRREAD HWSLDPRVAV
460 470 480 490 500
TEQIGEEIYR DNPLDRGHLV RRLDPAWGAT EAIAQLGNDD TFHFTNCSPQ
510 520 530 540 550
HKDFNQNKTT WAGLEDYILT NADNFDLKVT VVTGPVLAPD DDQYRGVQLP
560 570 580 590 600
RQFWKVVAMV KTGGALSATA YLLSQEELIH GLEAATEFDY GAYRTYQVPV
610 620 630 640
RRIAELTGLS FGDLEAADPL AGLESTSVAQ EIRTVADLVL
Length:640
Mass (Da):69,749
Last modified:October 5, 2010 - v1
Checksum:i3CE43A2125F71880
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002000 Genomic DNA. Translation: ADJ45179.1.
RefSeqiYP_003765581.1. NC_014318.1.

Genome annotation databases

EnsemblBacteriaiADJ45179; ADJ45179; AMED_3393.
GeneIDi9437589.
KEGGiamd:AMED_3393.
PATRICi42153910. VBIAmyMed151214_3504.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002000 Genomic DNA. Translation: ADJ45179.1 .
RefSeqi YP_003765581.1. NC_014318.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ45179 ; ADJ45179 ; AMED_3393 .
GeneIDi 9437589.
KEGGi amd:AMED_3393.
PATRICi 42153910. VBIAmyMed151214_3504.

Phylogenomic databases

HOGENOMi HOG000274111.
KOi K01173.
OMAi TNCSPQH.

Enzyme and pathway databases

BioCyci AMED749927:GCZN-3380-MONOMER.

Family and domain databases

Gene3Di 3.40.570.10. 1 hit.
InterProi IPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view ]
Pfami PF01223. Endonuclease_NS. 1 hit.
[Graphical view ]
SMARTi SM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.
[Graphical view ]
SUPFAMi SSF50494. SSF50494. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
    Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y.
    , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
    Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: U-32Imported.

Entry informationi

Entry nameiD8I5U0_AMYMU
AccessioniPrimary (citable) accession number: D8I5U0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3