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D8I5U0

- D8I5U0_AMYMU

UniProt

D8I5U0 - D8I5U0_AMYMU

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Protein
Submitted name:

Uncharacterized protein

Gene
AMED_3393
Organism
Amycolatopsis mediterranei (strain U-32)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: InterPro
  2. metal ion binding Source: InterPro
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAMED749927:GCZN-3380-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:AMED_3393Imported
OrganismiAmycolatopsis mediterranei (strain U-32)Imported
Taxonomic identifieri749927 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000000328: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000274111.
KOiK01173.
OMAiTNCSPQH.

Family and domain databases

Gene3Di3.40.570.10. 1 hit.
InterProiIPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF01223. Endonuclease_NS. 1 hit.
[Graphical view]
SMARTiSM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.

Sequencei

Sequence statusi: Complete.

D8I5U0-1 [UniParc]FASTAAdd to Basket

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MDVRTDRQAE QEQAAAARAA ERTGPRQAKI ALLRKPGGIA EADEPSRIAT    50
RIDRLGRYYP DIRPVSPAAI AAGDPAAMTA AGAILERIVL TNDLLGVGYL 100
EGGVAASAAV GRVNIRNAQG RLIGYGTGSL VSPELLLTNH HVLPDAEAAG 150
FSVIEFDYQD GIDGLPRPVR AFTLDPDRFF AADQELDFAL VAVKATADEL 200
RPFGFNRLIA SEGKAIVGDF VTIVQHPGGG KKQIALRENR VVDVLEEFLH 250
YETDTEPGSS GSPVFNDQWE VVALHHASVP AAGHAEYGGF LNEGIRVSKL 300
LKFLREQKFA PAQQALLDRL ATRPERAQPA ADGAAPVLTL SMPFDIRLRA 350
EAATGRIDPD YSNREGYDPA FLPGHTVPLP GLPDALAGLA AINRQARGEP 400
KYVLPYHHFS VVMHRERRLA MFTAVNIDGR TSRSLRREAD HWSLDPRVAV 450
TEQIGEEIYR DNPLDRGHLV RRLDPAWGAT EAIAQLGNDD TFHFTNCSPQ 500
HKDFNQNKTT WAGLEDYILT NADNFDLKVT VVTGPVLAPD DDQYRGVQLP 550
RQFWKVVAMV KTGGALSATA YLLSQEELIH GLEAATEFDY GAYRTYQVPV 600
RRIAELTGLS FGDLEAADPL AGLESTSVAQ EIRTVADLVL 640
Length:640
Mass (Da):69,749
Last modified:October 5, 2010 - v1
Checksum:i3CE43A2125F71880
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002000 Genomic DNA. Translation: ADJ45179.1.
RefSeqiYP_003765581.1. NC_014318.1.

Genome annotation databases

EnsemblBacteriaiADJ45179; ADJ45179; AMED_3393.
GeneIDi9437589.
KEGGiamd:AMED_3393.
PATRICi42153910. VBIAmyMed151214_3504.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002000 Genomic DNA. Translation: ADJ45179.1 .
RefSeqi YP_003765581.1. NC_014318.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ45179 ; ADJ45179 ; AMED_3393 .
GeneIDi 9437589.
KEGGi amd:AMED_3393.
PATRICi 42153910. VBIAmyMed151214_3504.

Phylogenomic databases

HOGENOMi HOG000274111.
KOi K01173.
OMAi TNCSPQH.

Enzyme and pathway databases

BioCyci AMED749927:GCZN-3380-MONOMER.

Family and domain databases

Gene3Di 3.40.570.10. 1 hit.
InterProi IPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view ]
Pfami PF01223. Endonuclease_NS. 1 hit.
[Graphical view ]
SMARTi SM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.
[Graphical view ]
SUPFAMi SSF50494. SSF50494. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
    Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y.
    , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
    Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: U-32.

Entry informationi

Entry nameiD8I5U0_AMYMU
AccessioniPrimary (citable) accession number: D8I5U0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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