D8I1N5 (D8I1N5_AMYMU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ADJ46966.1

Gene names

Name:	lig EMBL ADJ46966.1
Ordered Locus Names:	AMED_5203

Organism

Amycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ46966.1

Taxonomic identifier

749927 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADJ46966.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8I1N5 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: A6379CD8FD0973F5	FASTA	287	32,010
	10 20 30 40 50 60 MKTSHPDKVF YPEDGLTKGD VVEYYRAVAD VMLPHLRGRP LTLRRFPDGI GKPGWFQKHP 70 80 90 100 110 120 GEHFPDSIRV ERVPRRGGGT DEYVVCEDAA TLEYLANQGT VEFHVWLSTA DAPERPDRLV 130 140 150 160 170 180 LDLDPPDGTP VTELRTVARR IRDHYERVGL TAFVQATGGR GFHVLAPLDA KSETDVVLEL 190 200 210 220 230 240 SRALADRVAG DDPDRLTTAQ RKDQRGDRIF LDANRNGYAQ TFVAPYSLRA RPGAAAATPL 250 260 270 280 DWRELGTADP AGWSLVKEKR RLARKEDPWR DLDEHAGSAE AALKQLG

References

[1]

"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism." Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P. Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: U-32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002000 Genomic DNA. Translation: ADJ46966.1.
RefSeq	YP_003767368.1. NC_014318.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADJ46966; ADJ46966; AMED_5203.
GeneID	9439380.
KEGG	amd:AMED_5203.
PATRIC	42157686. VBIAmyMed151214_5389.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000244654.
KO	K01971.
Family and domain databases
InterPro	IPR014145. LigD_pol. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8I1N5_AMYMU

Accession

Primary (citable) accession number: D8I1N5

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)