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D8HUJ3 (D8HUJ3_AMYMU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AMED_0192 EMBL ADJ42015.1
OrganismAmycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ42015.1
Taxonomic identifier749927 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D8HUJ3 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: CD3B4DB96474A760

FASTA43046,133
        10         20         30         40         50         60 
MTDELLARHR AVMPSWMSLL YEEPIEIVHA HDRRMTDSQG RTYLDFFAGV LTNSMGYDVA 

        70         80         90        100        110        120 
EIGDAVRKQL DTGILHTSTL YLIRSQVELA ERIAKLSNIP DAKVFFTNSG SEANDTALML 

       130        140        150        160        170        180 
ATQYRRSNQV LAMRNSYHGR SFATVAITGN RGWSASSLSP VKVSYVHGGY RYRSPFRTMS 

       190        200        210        220        230        240 
DADYIDACVA DLVDVLDTAT AGDVACLIAE PIQGVGGFSL PPDGLFRAMK EVLDEYGVLF 

       250        260        270        280        290        300 
ISDEVQTGWG RTGEHFWGIE AHGVTPDMMT FAKGLGNGLA VGGVVARGDV LDCFQAQSFS 

       310        320        330        340        350        360 
TFGGNPVSMA GATAVLDYIK DHDLQANCAA RGAQLLSGLR AAESPIVAEV RGKGLMIGVE 

       370        380        390        400        410        420 
LIKPGTTEPF VAAAARMLEE TKKRGLLIGK GGLHGNVLRL GPPMTLTAEE AQEGLDILVD 

       430 
ALAATHAALS 

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References

[1]"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. expand/collapse author list , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: U-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002000 Genomic DNA. Translation: ADJ42015.1.
RefSeqYP_003762417.1. NC_014318.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ42015; ADJ42015; AMED_0192.
GeneID9434402.
KEGGamd:AMED_0192.
PATRIC42147253. VBIAmyMed151214_0197.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK00823.
OMATIYLHHA.

Enzyme and pathway databases

BioCycAMED749927:GCZN-193-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8HUJ3_AMYMU
AccessionPrimary (citable) accession number: D8HUJ3
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)