D8HUJ3 (D8HUJ3_AMYMU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase EMBL ADJ42015.1

Gene names

Ordered Locus Names:

AMED_0192

Organism

Amycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ42015.1

Taxonomic identifier

749927 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Amycolatopsis › Amycolatopsis mediterranei

Protein attributes

Sequence length	430 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADJ42015.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8HUJ3 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: CD3B4DB96474A760	FASTA	430	46,133
	10 20 30 40 50 60 MTDELLARHR AVMPSWMSLL YEEPIEIVHA HDRRMTDSQG RTYLDFFAGV LTNSMGYDVA 70 80 90 100 110 120 EIGDAVRKQL DTGILHTSTL YLIRSQVELA ERIAKLSNIP DAKVFFTNSG SEANDTALML 130 140 150 160 170 180 ATQYRRSNQV LAMRNSYHGR SFATVAITGN RGWSASSLSP VKVSYVHGGY RYRSPFRTMS 190 200 210 220 230 240 DADYIDACVA DLVDVLDTAT AGDVACLIAE PIQGVGGFSL PPDGLFRAMK EVLDEYGVLF 250 260 270 280 290 300 ISDEVQTGWG RTGEHFWGIE AHGVTPDMMT FAKGLGNGLA VGGVVARGDV LDCFQAQSFS 310 320 330 340 350 360 TFGGNPVSMA GATAVLDYIK DHDLQANCAA RGAQLLSGLR AAESPIVAEV RGKGLMIGVE 370 380 390 400 410 420 LIKPGTTEPF VAAAARMLEE TKKRGLLIGK GGLHGNVLRL GPPMTLTAEE AQEGLDILVD 430 ALAATHAALS

References

[1]

"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism." Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P. Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: U-32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002000 Genomic DNA. Translation: ADJ42015.1.
RefSeq	YP_003762417.1. NC_014318.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADJ42015; ADJ42015; AMED_0192.
GeneID	9434402.
KEGG	amd:AMED_0192.
PATRIC	42147253. VBIAmyMed151214_0197.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K00823.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8HUJ3_AMYMU

Accession

Primary (citable) accession number: D8HUJ3

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)