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D8HTW5

- D8HTW5_AMYMU

UniProt

D8HTW5 - D8HTW5_AMYMU

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig

Organism
Amycolatopsis mediterranei (strain U-32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAMED749927:GCZN-4462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Name:ligImported
Ordered Locus Names:AMED_4489Imported
OrganismiAmycolatopsis mediterranei (strain U-32)Imported
Taxonomic identifieri749927 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000000328: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000046158.
KOiK01971.
OMAiPAFVLHE.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8HTW5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVNAVNDRRP AFVLHEHFRP RHHFDLRLEE DGVLRSWAVP RGLPPDPGAD
60 70 80 90 100
RLAVAVPDHA LDHLDYEDET KKIADTGWWE EHDRTAKRIL FTLHGRVGSV
110 120
RYALIRTARD WLLHRTRDQP GDT
Length:123
Mass (Da):14,341
Last modified:October 5, 2010 - v1
Checksum:i7598094D59A00CB4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002000 Genomic DNA. Translation: ADJ46259.1.
RefSeqiYP_003766661.1. NC_014318.1.

Genome annotation databases

EnsemblBacteriaiADJ46259; ADJ46259; AMED_4489.
GeneIDi9438671.
KEGGiamd:AMED_4489.
PATRICi42156195. VBIAmyMed151214_4644.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002000 Genomic DNA. Translation: ADJ46259.1 .
RefSeqi YP_003766661.1. NC_014318.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADJ46259 ; ADJ46259 ; AMED_4489 .
GeneIDi 9438671.
KEGGi amd:AMED_4489.
PATRICi 42156195. VBIAmyMed151214_4644.

Phylogenomic databases

HOGENOMi HOG000046158.
KOi K01971.
OMAi PAFVLHE.

Enzyme and pathway databases

BioCyci AMED749927:GCZN-4462-MONOMER.

Family and domain databases

InterProi IPR014144. LigD_PE_domain.
[Graphical view ]
Pfami PF13298. LigD_N. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
    Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y.
    , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
    Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: U-32Imported.

Entry informationi

Entry nameiD8HTW5_AMYMU
AccessioniPrimary (citable) accession number: D8HTW5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3