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D8HTW5 (D8HTW5_AMYMU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:lig EMBL ADJ46259.1
Ordered Locus Names:AMED_4489 EMBL ADJ46259.1
OrganismAmycolatopsis mediterranei (strain U-32) [Complete proteome] [HAMAP] EMBL ADJ46259.1
Taxonomic identifier749927 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis

Protein attributes

Sequence length123 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADJ46259.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8HTW5 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 7598094D59A00CB4

FASTA12314,341
        10         20         30         40         50         60 
MVNAVNDRRP AFVLHEHFRP RHHFDLRLEE DGVLRSWAVP RGLPPDPGAD RLAVAVPDHA 

        70         80         90        100        110        120 
LDHLDYEDET KKIADTGWWE EHDRTAKRIL FTLHGRVGSV RYALIRTARD WLLHRTRDQP 


GDT 

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References

[1]"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. expand/collapse author list , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: U-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002000 Genomic DNA. Translation: ADJ46259.1.
RefSeqYP_003766661.1. NC_014318.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ46259; ADJ46259; AMED_4489.
GeneID9438671.
KEGGamd:AMED_4489.
PATRIC42156195. VBIAmyMed151214_4644.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000046158.
KOK01971.
OMAPAFVLHE.

Enzyme and pathway databases

BioCycAMED749927:GCZN-4462-MONOMER.

Family and domain databases

InterProIPR014144. LigD_PE_domain.
[Graphical view]
PfamPF13298. LigD_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8HTW5_AMYMU
AccessionPrimary (citable) accession number: D8HTW5
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)