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D8HTW5

- D8HTW5_AMYMU

UniProt

D8HTW5 - D8HTW5_AMYMU

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig

Organism
Amycolatopsis mediterranei (strain U-32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. ligase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAMED749927:GCZN-4462-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Name:ligImported
    Ordered Locus Names:AMED_4489Imported
    OrganismiAmycolatopsis mediterranei (strain U-32)Imported
    Taxonomic identifieri749927 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
    ProteomesiUP000000328: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000046158.
    KOiK01971.
    OMAiPAFVLHE.

    Family and domain databases

    InterProiIPR014144. LigD_PE_domain.
    [Graphical view]
    PfamiPF13298. LigD_N. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8HTW5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVNAVNDRRP AFVLHEHFRP RHHFDLRLEE DGVLRSWAVP RGLPPDPGAD    50
    RLAVAVPDHA LDHLDYEDET KKIADTGWWE EHDRTAKRIL FTLHGRVGSV 100
    RYALIRTARD WLLHRTRDQP GDT 123
    Length:123
    Mass (Da):14,341
    Last modified:October 5, 2010 - v1
    Checksum:i7598094D59A00CB4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002000 Genomic DNA. Translation: ADJ46259.1.
    RefSeqiWP_013226331.1. NC_014318.1.
    YP_003766661.1. NC_014318.1.

    Genome annotation databases

    EnsemblBacteriaiADJ46259; ADJ46259; AMED_4489.
    GeneIDi9438671.
    KEGGiamd:AMED_4489.
    PATRICi42156195. VBIAmyMed151214_4644.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002000 Genomic DNA. Translation: ADJ46259.1 .
    RefSeqi WP_013226331.1. NC_014318.1.
    YP_003766661.1. NC_014318.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADJ46259 ; ADJ46259 ; AMED_4489 .
    GeneIDi 9438671.
    KEGGi amd:AMED_4489.
    PATRICi 42156195. VBIAmyMed151214_4644.

    Phylogenomic databases

    HOGENOMi HOG000046158.
    KOi K01971.
    OMAi PAFVLHE.

    Enzyme and pathway databases

    BioCyci AMED749927:GCZN-4462-MONOMER.

    Family and domain databases

    InterProi IPR014144. LigD_PE_domain.
    [Graphical view ]
    Pfami PF13298. LigD_N. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
      Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y.
      , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
      Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: U-32Imported.

    Entry informationi

    Entry nameiD8HTW5_AMYMU
    AccessioniPrimary (citable) accession number: D8HTW5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3